RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 OR2T2Q6IF00 324 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 IQCF1Q8N6M8 205 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 OR10AD1Q8NGE0 317 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 SLC30A2Q9BRI3 323 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 SSBP3Q9BWW4 388 aaPredicted RBP15.86■□□□□ 0.13
CDX1-202ENST00000616154 ZNF696Q9H7X3 374 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 WDR76Q9H967 626 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 TMEM165Q9HC07 324 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 TVP23AA6NH52 213 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 F5H5K5 113 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 M0R135 149 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 FSTL3O95633 263 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 HMGN1P05114 100 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 RPS2P15880 293 aaKnown RBP15.85■□□□□ 0.13
CDX1-202ENST00000616154 SELEP16581 610 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 TPTEP56180 551 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 IL18R1Q13478 541 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 GK2Q14410 553 aaPredicted RBP15.85■□□□□ 0.13
CDX1-202ENST00000616154 ZNF181Q2M3W8 571 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 LRRN1Q6UXK5 716 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 C9orf139Q6ZV77 190 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 OR51L1Q8NGJ5 315 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 ZNF420Q8TAQ5 688 aaPredicted RBP15.85■□□□□ 0.13
CDX1-202ENST00000616154 ZNF799Q96GE5 643 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 ZNF582Q96NG8 517 aaPredicted RBP15.85■□□□□ 0.13
CDX1-202ENST00000616154 MS4A7Q9GZW8 240 aaPredicted RBP15.85■□□□□ 0.13
CDX1-202ENST00000616154 MIOXQ9UGB7 285 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 RAB26Q9ULW5 256 aa15.85■□□□□ 0.13
CDX1-202ENST00000616154 MLNRO43193 412 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 CYB5R3P00387 301 aaPredicted RBP15.84■□□□□ 0.13
CDX1-202ENST00000616154 GYPBP06028 91 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 CLUP10909 449 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 RPS27P42677 84 aaKnown RBP15.84■□□□□ 0.13
CDX1-202ENST00000616154 ZNF691Q5VV52 312 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 DRAM2Q6UX65 266 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 BTNL3Q6UXE8 466 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 RHOUQ7L0Q8 258 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 DCXRQ7Z4W1 244 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 KLBQ86Z14 1044 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 ZNF511Q8NB15 262 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 ZNF555Q8NEP9 628 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 SPTSSAQ969W0 71 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 SLC25A28Q96A46 364 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 DACT3Q96B18 629 aaPredicted RBP15.84■□□□□ 0.13
CDX1-202ENST00000616154 UPRTQ96BW1 309 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 HCAR1Q9BXC0 346 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 ANKRD60Q9BZ19 345 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 LRRC42Q9Y546 428 aa15.84■□□□□ 0.13
CDX1-202ENST00000616154 IGHV2-70DA0A0C4DH43 119 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 LRRC30A6NM36 301 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 H0YL77 283 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 ZNF205O95201 554 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 GNAO1P09471 354 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 IGHV4-38-2P0DP08 117 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 MTNR1AP48039 350 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 GNB2P62879 340 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 SLC9A3R2Q15599 337 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 NAA40Q86UY6 237 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 MOGAT3Q86VF5 341 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 FBLIM1Q8WUP2 373 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 TRUB1Q8WWH5 349 aaKnown RBP15.83■□□□□ 0.12
CDX1-202ENST00000616154 CYGBQ8WWM9 190 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 NEIL1Q96FI4 390 aaPredicted RBP15.83■□□□□ 0.12
CDX1-202ENST00000616154 TMEM246Q9BRR3 403 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 PRRG3Q9BZD7 231 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 UNKLQ9H9P5 680 aaKnown RBP15.83■□□□□ 0.12
CDX1-202ENST00000616154 GMPPBQ9Y5P6 360 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 HSPE1-MOB4S4R3N1 261 aa15.83■□□□□ 0.12
CDX1-202ENST00000616154 ZNF878C9JN71 531 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 F5H5P2 479 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 ZNF593O00488 134 aaPredicted RBP15.82■□□□□ 0.12
CDX1-202ENST00000616154 GLCEO94923 617 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 PLATP00750 562 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 LCATP04180 440 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 GABRB1P18505 474 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 GATA4P43694 442 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 CDC42P60953 191 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 IL13RA1P78552 427 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 MALLQ13021 153 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 ZNF404Q494X3 552 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 SLC25A30Q5SVS4 291 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 TIGD4Q8IY51 512 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 C1orf87Q8N0U7 546 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 CELF2-AS1Q8N7Q2 184 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 OR8J1Q8NGP2 316 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 RAB40AQ8WXH6 277 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 SLAMF6Q96DU3 332 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 PLEKHA8Q96JA3 519 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 KCNJ15Q99712 375 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 TEX12Q9BXU0 123 aa15.82■□□□□ 0.12
CDX1-202ENST00000616154 FAM183AA6NL82 134 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 DENRO43583 198 aaKnown RBP15.81■□□□□ 0.12
CDX1-202ENST00000616154 PRKYO43930 277 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 SPARCP09486 303 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 ANOS1P23352 680 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 ISL1P61371 349 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 SNRPGP62308 76 aaKnown RBP15.81■□□□□ 0.12
CDX1-202ENST00000616154 SNAI3Q3KNW1 292 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 NLRC3Q7RTR2 1065 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 BHLHE23Q8NDY6 225 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms