RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 OXGR1Q96P68 337 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ASF1BQ9NVP2 202 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MRPL22Q9NWU5 206 aaKnown RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ELF5Q9UKW6 265 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SCN5AQ14524 2016 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MED13Q9UHV7 2174 aa5.03□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF646O15015 1829 aaPredicted RBP5.03□□□□□ -1.61
SYNCRIP-204ENST00000616122 CHD5Q8TDI0 1954 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ANKUB1A6NFN9 424 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR6C76A6NM76 312 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TO15178 435 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR8U9P0C7N5 309 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CCL4P13236 92 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF626Q68DY1 528 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 FBXW12Q6X9E4 464 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 LINC00114Q6XXX2 140 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 PGAP1Q75T13 922 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ESX1Q8N693 406 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 SLC38A9Q8NBW4 561 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 STRADBQ9C0K7 418 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 PARPBPQ9NWS1 579 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 GLS2Q9UI32 602 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CLDN16Q9Y5I7 305 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 MKI67P46013 3256 aaKnown RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 NAV3Q8IVL0 2385 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A087WV48 116 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A1W2PPC1 479 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 LIPT2A6NK58 231 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR2F2O95006 317 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 RRASP10301 218 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ENPP1P22413 925 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 GDF1P27539 372 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CYB561P49447 251 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 BAMBIQ13145 260 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR2F1Q13607 317 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 LAMTOR1Q6IAA8 161 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 HAGHLQ6PII5 290 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF100Q8IYN0 542 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ARHGEF39Q8N4T4 335 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 GVQW1Q8N7I0 195 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 EXD3Q8N9H8 876 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ST8SIA2Q92186 375 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 PIGCQ92535 297 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CHRNA10Q9GZZ6 450 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A0B4J2A0 478 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF354AO60765 605 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CEBPGP53567 150 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF121P58317 390 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 VAMP2P63027 116 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 PPP1R1AQ13522 171 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 GNMTQ14749 295 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TCEAL6Q6IPX3 200 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR1J2Q8NGS2 313 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ADIPOR1Q96A54 375 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 FAM131CQ96AQ9 280 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 KLHDC3Q9BQ90 382 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZFP57Q9NU63 452 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 SHPKQ9UHJ6 478 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 LSM5Q9Y4Y9 91 aaKnown RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 HIVEP3Q5T1R4 2406 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 RNF212BA8MTL3 300 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TRAF3IP2O43734 574 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 SYNGR4O95473 234 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 PRKACBP22694 351 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TAS2R46P59540 309 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 NR0B2Q15466 257 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TUSC1Q2TAM9 212 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ACTBL2Q562R1 376 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TMEM128Q5BJH2 165 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 FJX1Q86VR8 437 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 FBXL14Q8N1E6 418 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 APCDD1LQ8NCL9 501 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CCDC74BQ96LY2 380 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF285Q96NJ3 590 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 SPSB2Q99619 263 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 SMIM3Q9BZL3 60 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 RTN4RQ9BZR6 473 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CHST6Q9GZX3 395 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 AKIRIN1Q9H9L7 192 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A1W2PP11 408 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 hCG_1807616A0A1W2PRN6 198 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 RFPL4AA6NLU0 287 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 RFPL4AL1F8VTS6 287 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 H3BUI4 141 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TOR1AO14656 332 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TOX3O15405 576 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CBR3O75828 277 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TSPAN15O95858 294 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF44P15621 663 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 GNRHRP30968 328 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 RBP2P50120 134 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 GRB2P62993 217 aaKnown RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 FZD5Q13467 585 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 SFRP5Q5T4F7 317 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR5M8Q8NGP6 311 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 STOML3Q8TAV4 291 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 DHRS9Q9BPW9 319 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 MESP1Q9BRJ9 268 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 METTL9Q9H1A3 318 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms