RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 FJX1Q86VR8 437 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 COMMD7Q86VX2 200 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 ARHGEF39Q8N4T4 335 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 ST3GAL6Q9Y274 331 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 EXOGQ9Y2C4 368 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 A0A1B0GTH9 108 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 BGLAPP02818 100 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 IFNA4P05014 189 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 COX6A1P12074 109 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 HOXA1P49639 335 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 ALKBH6Q3KRA9 238 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 C1orf185Q5T7R7 199 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 GPR157Q5UAW9 335 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 OR2T2Q6IF00 324 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 SLC36A1Q7Z2H8 476 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 TSEN54Q7Z6J9 526 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 GIMAP1Q8WWP7 306 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 S100PBPQ96BU1 408 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 C4orf45Q96LM5 186 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 SULT4A1Q9BR01 284 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 PBDC1Q9BVG4 233 aa8.41□□□□□ -1.06
CLTCL1-208ENST00000615606 CCL21O00585 134 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 PHF1O43189 567 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 GPM6AP51674 278 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 PPP1CBP62140 327 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 S100A12P80511 92 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 RNLSQ5VYX0 342 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 CMTM4Q8IZR5 234 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 OR4D11Q8NGI4 311 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF649Q9BS31 505 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 MFFQ9GZY8 342 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 FAM234AQ9H0X4 552 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 ADGRL4Q9HBW9 690 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 MYOZ1Q9NP98 299 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 MGAMO43451 1857 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 TRIM64BA6NI03 449 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 NDUFB3O43676 98 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 WDR1O75083 606 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 SPDEFO95238 335 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 CST2P09228 141 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 MGMTP16455 207 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 ACSM1Q08AH1 577 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 TATDN3Q17R31 274 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 WDR38Q5JTN6 314 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 LGI3Q8N145 548 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 TMEM251Q8N6I4 163 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 DVL3Q92997 716 aaPredicted RBP8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 S1PR3Q99500 378 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 SPSB2Q99619 263 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 HIPK2Q9H2X6 1198 aa8.4□□□□□ -1.06
CLTCL1-208ENST00000615606 IGKV1D-16P01601 117 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 S100PP25815 95 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 ID4P47928 161 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 RAP2BP61225 183 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 ZNF808Q8N4W9 903 aaPredicted RBP8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 OR10X1Q8NGY0 326 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 ZNF355PQ9NSJ1 428 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 FOXJ2Q9P0K8 574 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 A0A1B0GV50 99 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 LUMP51884 338 aaPredicted RBP8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 GNB2P62879 340 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 PCOLCEQ15113 449 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 OR8D4Q8NGM9 314 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 OR6K3Q8NGY3 331 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 PAQR8Q8TEZ7 354 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 TCTEX1D2Q8WW35 142 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 RAB1BQ9H0U4 201 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 IL17BQ9UHF5 180 aa8.4□□□□□ -1.07
CLTCL1-208ENST00000615606 SLC17A2O00624 439 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 HSD17B6O14756 317 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 ELK1P19419 428 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 SELENOPP49908 381 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 IGLV3-21P80748 117 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 HFEQ30201 348 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 ABHD3Q8WU67 409 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 HAO2Q9NYQ3 351 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 ZNF646O15015 1829 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 AHRRA9YTQ3 701 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 FFAR1O14842 300 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 AGFG2O95081 481 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 ACAA2P42765 397 aaKnown RBP8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 GPR12P47775 334 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 NPY4RP50391 375 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 CSRP3P50461 194 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 RAB5BP61020 215 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 MICBQ29980 383 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 MESTQ5EB52 335 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 SFRP5Q5T4F7 317 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 FBXW9Q5XUX1 488 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 GABRG1Q8N1C3 465 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 ZCCHC14Q8WYQ9 949 aaKnown RBP8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 SEH1LQ96EE3 360 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 PELI1Q96FA3 418 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 GPR35Q9HC97 309 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 CYSLTR2Q9NS75 346 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 NTMQ9P121 344 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 LOC101059948A0A1B0GTJ6 334 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 TMEM235A6NFC5 223 aa8.39□□□□□ -1.07
CLTCL1-208ENST00000615606 C16orf97H3BN30 126 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms