RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 A6NIN4 97 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 ZNF879B4DU55 563 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 XRCC2O43543 280 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 LILRA1O75019 489 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 PLAUP00749 431 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 APOC1P02654 83 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 UCHL1P09936 223 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 PPP3CBP16298 524 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 FGF9P31371 208 aaPredicted RBP6.9□□□□□ -1.3
PCDH9-205ENST00000614931 PPP1CBP62140 327 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 NKX6-1P78426 367 aaPredicted RBP6.9□□□□□ -1.3
PCDH9-205ENST00000614931 FAM3AP98173 230 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 BSPH1Q075Z2 132 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 SNTB2Q13425 540 aaKnown RBP6.9□□□□□ -1.3
PCDH9-205ENST00000614931 GK2Q14410 553 aaPredicted RBP6.9□□□□□ -1.3
PCDH9-205ENST00000614931 ALKBH6Q3KRA9 238 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 Q499Y3 187 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 YIF1BQ5BJH7 314 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 ZMAT1Q5H9K5 638 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 C1QTNF12Q5T7M4 302 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 TMEM244Q5VVB8 128 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 ZNF544Q6NX49 715 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 CEACAM19Q7Z692 300 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 NR2C2APQ86WQ0 139 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 COMMD2Q86X83 199 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 MS4A15Q8N5U1 240 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 OR52H1Q8NGJ2 320 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 SLC25A40Q8TBP6 338 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 TSEN15Q8WW01 171 aaKnown RBP6.9□□□□□ -1.3
PCDH9-205ENST00000614931 MBD6Q96DN6 1003 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 GFI1Q99684 422 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 SLC30A2Q9BRI3 323 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 OR2J1Q9GZK6 312 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 NOX4Q9NPH5 578 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 BATF3Q9NR55 127 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 TBCCD1Q9NVR7 557 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 NDRG3Q9UGV2 375 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.3
PCDH9-205ENST00000614931 FZR1Q9UM11 496 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 HHLA2Q9UM44 414 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 EDARQ9UNE0 448 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 SSR3Q9UNL2 185 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 ABCA4P78363 2273 aa6.9□□□□□ -1.31
PCDH9-205ENST00000614931 POLQO75417 2590 aa6.9□□□□□ -1.31
PCDH9-205ENST00000614931 ANKRD17O75179 2603 aaKnown RBP6.9□□□□□ -1.31
PCDH9-205ENST00000614931 A0A1B0GVI7 797 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 LOC390937A0A1W2PQ73 354 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 CCDC160A6NGH7 325 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 TRIM64BA6NI03 449 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 DEFB108AA8MXU0 73 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 ABCD4O14678 606 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 CASKO14936 926 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 SYT7O43581 403 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 DHRS3O75911 302 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 HLA-DPB1P04440 258 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 OCM2P0CE71 109 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 FAHP16930 419 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 ADRA2CP18825 462 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 DNASE1P24855 282 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 PTAFRP25105 342 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 PSMA1P25786 263 aaKnown RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 GSK3AP49840 483 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 TMBIM6P55061 237 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 UCP2P55851 309 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 OR8B8Q15620 311 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 TRAM1Q15629 374 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 DMRTC1Q5HYR2 192 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 NCMAPQ5T1S8 102 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 PAMR1Q6UXH9 720 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 DOK3Q7L591 496 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 RNF144BQ7Z419 303 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 LRRTM1Q86UE6 522 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 KBTBD8Q8NFY9 601 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 OR56B2PQ8NGI1 322 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 OR51A2Q8NGJ7 313 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 OR1J1Q8NGS3 322 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 OR13C3Q8NGS6 347 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF420Q8TAQ5 688 aaPredicted RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 GPR148Q8TDV2 347 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 RAB2BQ8WUD1 216 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 NEUROG1Q92886 237 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 MARS2Q96GW9 593 aaKnown RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 HS3ST6Q96QI5 342 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 NKX3-1Q99801 234 aaPredicted RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 REPIN1Q9BWE0 567 aaKnown RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 FGF23Q9GZV9 251 aaPredicted RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 MOV10Q9HCE1 1003 aaKnown RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF275Q9NSD4 429 aaPredicted RBP6.89□□□□□ -1.31
PCDH9-205ENST00000614931 TAS2R4Q9NYW5 299 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 DHDHQ9UQ10 334 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 PLEKHA6Q9Y2H5 1048 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 CELSR1Q9NYQ6 3014 aa6.89□□□□□ -1.31
PCDH9-205ENST00000614931 HRNRQ86YZ3 2850 aaPredicted RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 A0A0G2JK05 382 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 A0A1W2PPR1 153 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 A0A1W2PPW3 197 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 SHISA9B4DS77 424 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 J3QW42 95 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms