RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 STOMP27105 288 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 HTR2CP28335 458 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 NR4A2P43354 598 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 RANBP1P43487 201 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 CAPZA1P52907 286 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 ART1P52961 327 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 DEFA1P59665 94 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 DEFA3P59666 94 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 HGFACQ04756 655 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 SCN1BQ07699 218 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 OXA1LQ15070 435 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 P2RY14Q15391 338 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 EIF2S3LQ2VIR3 472 aaKnown RBP7.75□□□□□ -1.17
CCDC47-207ENST00000612558 TRIM16LQ309B1 348 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 LINC00303Q3SY05 128 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 C1orf100Q5SVJ3 147 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 GLYATL3Q5SZD4 288 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 C1orf185Q5T7R7 199 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 RTL6Q6ICC9 239 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 PYHIN1Q6K0P9 492 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 Q6ZNX1 250 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 DCDC5Q6ZRR9 648 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 SEM1Q6ZVN7 128 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 LYPD6Q86Y78 171 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 ZGRF1Q86YA3 2104 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 CCDC36Q8IYA8 594 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 CENPSQ8N2Z9 138 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 Q8N402 240 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 CISD2Q8N5K1 135 aaKnown RBP7.75□□□□□ -1.17
CCDC47-207ENST00000612558 POC5Q8NA72 575 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 FAM57AQ8TBR7 257 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 WFDC12Q8WWY7 111 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 RAB40AQ8WXH6 277 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 FAM3DQ96BQ1 224 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 S100A16Q96FQ6 103 aaKnown RBP7.75□□□□□ -1.17
CCDC47-207ENST00000612558 SORCS2Q96PQ0 1159 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 C1QTNF5Q9BXJ0 243 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 B3GNT2Q9NY97 397 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 BSNQ9UPA5 3926 aa7.75□□□□□ -1.17
CCDC47-207ENST00000612558 NCOR2Q9Y618 2525 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 LOC100509620A0A075B734 347 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 A0A0G2JMP0 313 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 A0A0X1KG70 313 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 LOC100289279A0A1B0GTE1 492 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 CIB4A0PJX0 185 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 ZNF503-AS2A6NEH8 195 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 MAGEB3O15480 346 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 XRCC2O43543 280 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 TNFSF13O75888 250 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 ALX3O95076 343 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 THBS4P35443 961 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 TIMP3P35625 211 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 PITPNAQ00169 270 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 FOXF2Q12947 444 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 MADCAM1Q13477 382 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 GSG1Q2KHT4 349 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 C2orf76Q3KRA6 126 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 TBRG1Q3YBR2 411 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 HIKESHIQ53FT3 197 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 VWA1Q6PCB0 445 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 COLCA1Q6ZS62 124 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 CDH26Q8IXH8 852 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 CMTM4Q8IZR5 234 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 JAGN1Q8N5M9 183 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 OR4M2Q8NGB6 313 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 OR51D1Q8NGF3 324 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 OR13C9Q8NGT0 318 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 SYNPRQ8TBG9 265 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 SETD6Q8TBK2 473 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 PP6455Q8WZ26 134 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 SLC25A28Q96A46 364 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 HAVCR1Q96D42 359 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 SLC25A38Q96DW6 304 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 REEP6Q96HR9 211 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 BOD1Q96IK1 185 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 ZFP3Q96NJ6 502 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 UQCC2Q9BRT2 126 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 METTL17Q9H7H0 456 aaPredicted RBP7.74□□□□□ -1.17
CCDC47-207ENST00000612558 NOX3Q9HBY0 568 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 RHBDL2Q9NX52 303 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 PROCRQ9UNN8 238 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 PIGLQ9Y2B2 252 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 FAM215AQ9Y5M1 114 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 MYO7BQ6PIF6 2116 aa7.74□□□□□ -1.17
CCDC47-207ENST00000612558 TLN1Q9Y490 2541 aaKnown RBP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 BOD1L1Q8NFC6 3051 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 C5orf49A4QMS7 147 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 TPPPO94811 219 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 CGAP01215 116 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 ALDOBP05062 364 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 C1QTNF9P0C862 333 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 TMIGD3P0DMS9 266 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 ARSBP15848 533 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 COX5AP20674 150 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 ZNF93P35789 620 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 POU3F4P49335 361 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 MMP15P51511 669 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 TDGF1P3P51864 188 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 UBE2NP61088 152 aaKnown RBP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 RIPPLY1Q0D2K3 151 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms