RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TRAPPC4Q9Y296 219 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF732B4DXR9 585 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 SIRPB1O00241 398 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 PHF1O43189 567 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 SEMG1P04279 462 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 LIFP15018 202 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 CD96P40200 585 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 CLDN20P56880 219 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 CLVS2Q5SYC1 327 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 GPR157Q5UAW9 335 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 DMKNQ6E0U4 476 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 DEGS2Q6QHC5 323 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 PLXDC2Q6UX71 529 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 TSEN54Q7Z6J9 526 aaKnown RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 TUSC5Q8IXB3 177 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 PRSS35Q8N3Z0 413 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 OR51A2Q8NGJ7 313 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ADIPOR1Q96A54 375 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF385AQ96PM9 386 aaKnown RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 DECR2Q9NUI1 292 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 DIDO1Q9BTC0 2240 aaKnown RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF816-ZNF321PA0A0X1KG74 233 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 DCTN6O00399 190 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 NKX2-8O15522 239 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 FBXO24O75426 580 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 CRYABP02511 175 aaKnown RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ETV6P41212 452 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 CAMLGP49069 296 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ACSM1Q08AH1 577 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 BAMBIQ13145 260 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 CAMK2BQ13554 666 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 HNF4GQ14541 408 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 PLGLAQ15195 96 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 RNPS1Q15287 305 aaKnown RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ALKBH6Q3KRA9 238 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 OR2T2Q6IF00 324 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 DRAM2Q6UX65 266 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF767PQ75MW2 155 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ZDHHC23Q8IYP9 409 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 FAM181AQ8N9Y4 354 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF610Q8N9Z0 462 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 SUMF1Q8NBK3 374 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 OR4S1Q8NGB4 309 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 OR51H1Q8NH63 302 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 H1FXQ92522 213 aaKnown RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 APOBEC3DQ96AK3 386 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 CMBLQ96DG6 245 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 SNX18Q96RF0 628 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 AIFM2Q9BRQ8 373 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 POFUT1Q9H488 388 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 SCPEP1Q9HB40 452 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 FRRS1LQ9P0K9 344 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 IL17BQ9UHF5 180 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 NOTCH4Q99466 2003 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 A0A0J9YW62 118 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 TGFBR3LH3BV60 316 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 K7ESF4 209 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 TUSC2O75896 110 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 IGHA1P01876 353 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 GP1BAP07359 652 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 NGFRP08138 427 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ATF4P18848 351 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 NFYBP25208 207 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 PTGS2P35354 604 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 HRH1P35367 487 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 RAB35Q15286 201 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 POU4F3Q15319 338 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 IAH1Q2TAA2 248 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 PLPPR5Q32ZL2 321 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF718Q3SXZ3 478 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ALKAL2Q6UX46 152 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 CXorf67Q86X51 503 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 FBXL14Q8N1E6 418 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 OR56B2PQ8NGI1 322 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 SMIM4Q8WVI0 70 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 PP6455Q8WZ26 134 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 LIN37Q96GY3 246 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 LOXL4Q96JB6 756 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ATP23Q9Y6H3 246 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ANKRD34CP0C6C1 535 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ACSM4P0C7M7 580 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 KIR2DL3P43628 341 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 LIMS1P48059 325 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 GPM6AP51674 278 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 KISS1Q15726 138 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 LHFPL2Q6ZUX7 228 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF573Q86YE8 665 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 OR52N4Q8NGI2 321 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 OR10R2Q8NGX6 335 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 DDOQ99489 341 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF2Q9BSG1 426 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 RAB9BQ9NP90 201 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 OR5V1Q9UGF6 321 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 POLDIP2Q9Y2S7 368 aa6.47□□□□□ -1.37
CSDE1-218ENST00000610726 MTCL1Q9Y4B5 1905 aaKnown RBP6.47□□□□□ -1.37
CSDE1-218ENST00000610726 MEX3AA1L020 520 aaKnown RBP6.46□□□□□ -1.37
CSDE1-218ENST00000610726 XRCC3O43542 346 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 IFNA17P01571 189 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms