RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 SONP18583 2426 aaKnown RBP14.21□□□□□ -0.14
TRIM28-215ENST00000601150 A0A0U1RQV5 110 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 LOC100130705A0A1B0GUX0 176 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 LRRC30A6NM36 301 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 SNTNA6NMZ2 147 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 TMEM178BH3BS89 294 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 MPZL2O60487 215 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 CRLF1O75462 422 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 IGHV2-70P01814 119 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 MTNR1AP48039 350 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 MZT1Q08AG7 82 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 OR8B8Q15620 311 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF181Q2M3W8 571 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 FTMTQ8N4E7 242 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 OR10H4Q8NGA5 316 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 ERGIC1Q969X5 290 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 POM121Q96HA1 1249 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 PBOV1Q9GZY1 135 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 C8orf4Q9NR00 106 aa14.2□□□□□ -0.14
TRIM28-215ENST00000601150 SMPD3Q9NY59 655 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-215ENST00000601150 MRM2Q9UI43 246 aaKnown RBP14.2□□□□□ -0.14
TRIM28-215ENST00000601150 A0A1W2PQL4 384 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-215ENST00000601150 FAM157AC9JC47 383 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 LOC110117498-PIK3R3F6TDL0 507 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 SLC16A6O15403 523 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 MAGEB4O15481 346 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-215ENST00000601150 IGHV2-5P01817 119 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 KRT8P05787 483 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 IRF2P14316 349 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 RBMXP38159 391 aaKnown RBP14.19□□□□□ -0.14
TRIM28-215ENST00000601150 GNALP38405 381 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 BTG1P62324 171 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 LRRC36Q1X8D7 754 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 PRAMEF6Q5VXH4 476 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 SSX6Q7RTT6 188 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 ENTHD1Q8IYW4 607 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 C1orf87Q8N0U7 546 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 GALNT4Q8N4A0 578 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 PACRGLQ8N7B6 248 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF555Q8NEP9 628 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 OR11L1Q8NGX0 322 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 OR8S1Q8NH09 359 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 DVL3Q92997 716 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-215ENST00000601150 ITFG2Q969R8 447 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 RNFT2Q96EX2 444 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 LYZL4Q96KX0 146 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 MOB1AQ9H8S9 216 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 FN3KRPQ9HA64 309 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 C14orf119Q9NWQ9 140 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 NUFIP1Q9UHK0 495 aaKnown RBP14.19□□□□□ -0.14
TRIM28-215ENST00000601150 R4GMQ9 66 aa14.19□□□□□ -0.14
TRIM28-215ENST00000601150 SRSF10O75494 262 aaKnown RBP14.18□□□□□ -0.14
TRIM28-215ENST00000601150 PTBP3O95758 552 aaKnown RBP14.18□□□□□ -0.14
TRIM28-215ENST00000601150 CYB5R3P00387 301 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-215ENST00000601150 PNPP00491 289 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 MSMBP08118 114 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 GABRB1P18505 474 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 PMELP40967 661 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 DVL1P1P54792 670 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-215ENST00000601150 MFGE8Q08431 387 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-215ENST00000601150 ZMYND11Q15326 602 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 MPPED2Q15777 294 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 TMEM155Q4W5P6 130 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 LPCAT4Q643R3 524 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 LRRC28Q86X40 367 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-215ENST00000601150 COMMD2Q86X83 199 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 SPICQ8N5J4 248 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 YIPF7Q8N8F6 280 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 PLPP7Q8NBV4 271 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 RHOXF1Q8NHV9 184 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 Q8TCH9 128 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 Q96MT0 163 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 PAPOLGQ9BWT3 736 aaKnown RBP14.18□□□□□ -0.14
TRIM28-215ENST00000601150 UFSP2Q9NUQ7 469 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 UBAP1Q9NZ09 502 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 CDC42EP3Q9UKI2 254 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 RHBDD3Q9Y3P4 386 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 MPC1Q9Y5U8 109 aa14.18□□□□□ -0.14
TRIM28-215ENST00000601150 METTL15A6NJ78 407 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 DLGAP1O14490 977 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 FAM20BO75063 409 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 SULT1C4O75897 302 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 GRPP07492 148 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 ATP6V1B1P15313 513 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 ACKR3P25106 362 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 PEX2P28328 305 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 MDH2P40926 338 aaKnown RBP14.17□□□□□ -0.14
TRIM28-215ENST00000601150 MAP2K3P46734 347 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 ACTC1P68032 377 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 ACTA1P68133 377 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 BCL2L15Q5TBC7 163 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 PLEKHG7Q6ZR37 379 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF771Q7L3S4 317 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-215ENST00000601150 GLCCI1Q86VQ1 547 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 MUC20Q8N307 709 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-215ENST00000601150 KLHL36Q8N4N3 616 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 OR51F2Q8NH61 342 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 OR51E1Q8TCB6 317 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 LPAR2Q9HBW0 351 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 ABCB9Q9NP78 766 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms