RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	CA6	P23280	308 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	CFL1	P23528	166 aa	Known RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	BTG1	P62324	171 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	MVK	Q03426	396 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	EGR3	Q06889	387 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	MPPED2	Q15777	294 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	OCLN	Q16625	522 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	CR1L	Q2VPA4	569 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	AVPI1	Q5T686	147 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	KCTD18	Q6PI47	426 aa	Predicted RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	SPATC1	Q76KD6	591 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	SSX6	Q7RTT6	188 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	MRPL21	Q7Z2W9	205 aa	Known RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	WDR86	Q86TI4	376 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	CBR4	Q8N4T8	237 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	RHOXF1	Q8NHV9	184 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	UBE2F	Q969M7	185 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	TMEM186	Q96B77	213 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	REEP6	Q96HR9	211 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	RAB3IP	Q96QF0	476 aa	Predicted RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	CNN2	Q99439	309 aa	Known RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZNF649	Q9BS31	505 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	FGF23	Q9GZV9	251 aa	Predicted RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	NARFL	Q9H6Q4	476 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	PATZ1	Q9HBE1	687 aa	Known RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	MRM2	Q9UI43	246 aa	Known RBP	7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	LAMP5	Q9UJQ1	280 aa		7.37	□□□□□ -1.23
SSBP4-208	ENST00000600628	TRAV20	A0A0B4J274	112 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	DHRS7C	A6NNS2	312 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	PLPP2	O43688	288 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	FAM20B	O75063	409 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	AVP	P01185	164 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	TTR	P02766	147 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	WNT2	P09544	360 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR2T7	P0C7T2	308 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ATP6V1B1	P15313	513 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	SRD5A1	P18405	259 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	HNF1A	P20823	631 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	CCL1	P22362	96 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZFP36	P26651	326 aa	Known RBP	7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	HSD11B1	P28845	292 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	PSMB10	P40306	273 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	MDH2	P40926	338 aa	Known RBP	7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	CDC42	P60953	191 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	POU4F2	Q12837	409 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	TAF13	Q15543	124 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZNF404	Q494X3	552 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZBTB37	Q5TC79	503 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	TMEM42	Q69YG0	159 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZNF322	Q6U7Q0	402 aa	Predicted RBP	7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZNF841	Q6ZN19	808 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	IL17REL	Q6ZVW7	336 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	FAM57B	Q71RH2	274 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	MOGAT3	Q86VF5	341 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	EGFL6	Q8IUX8	553 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	SLC35F2	Q8IXU6	374 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ELMOD2	Q8IZ81	293 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	SPERT	Q8NA61	448 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	CSNK2A3	Q8NEV1	391 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR2T27	Q8NH04	317 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZNF420	Q8TAQ5	688 aa	Predicted RBP	7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	THEM6	Q8WUY1	208 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	SPRYD4	Q8WW59	207 aa	Predicted RBP	7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	HPSE2	Q8WWQ2	592 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	OTULIN	Q96BN8	352 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	RAB39B	Q96DA2	213 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	TIMD4	Q96H15	378 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	RDH12	Q96NR8	316 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	C9orf16	Q9BUW7	83 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR10A2	Q9H208	303 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	RIBC2	Q9H4K1	309 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	PPP1R3E	Q9H7J1	279 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	MRPS18A	Q9NVS2	196 aa	Known RBP	7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628	OPN4	Q9UHM6	478 aa		7.36	□□□□□ -1.23
SSBP4-208	ENST00000600628		A0A1B0GTI1	187 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	TMEM269	A0A1B0GVZ9	245 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628		A0A1W2PQL4	384 aa	Predicted RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	CEACAM18	A8MTB9	384 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	PHYH	O14832	338 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	ENTPD6	O75354	484 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	FCN3	O75636	299 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	SULT1C4	O75897	302 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	ANXA2	P07355	339 aa	Known RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	MRPL3	P09001	348 aa	Known RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	ANPEP	P15144	967 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	PCMT1	P22061	227 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	GATA3	P23771	443 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	CXCR4	P61073	352 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	RPS7	P62081	194 aa	Known RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	MFGE8	Q08431	387 aa	Predicted RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR8G1	Q15617	311 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	TIGD6	Q17RP2	521 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	MEDAG	Q5VYS4	303 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	TEX36	Q5VZQ5	186 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	FDX2	Q6P4F2	183 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	PEG10	Q86TG7	708 aa	Known RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	GLCCI1	Q86VQ1	547 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	ENTHD1	Q8IYW4	607 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	GALNT4	Q8N4A0	578 aa		7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms