RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 C11orf44Q8N8P7 122 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 BEND2Q8NDZ0 799 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 OR56B2PQ8NGI1 322 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 OR4K13Q8NH42 304 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 OR5R1Q8NH85 324 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 ST8SIA4Q92187 359 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 PPP1R14AQ96A00 147 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 ZNF799Q96GE5 643 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 HSH2DQ96JZ2 352 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 ERMAPQ96PL5 475 aaPredicted RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 ADAT1Q9BUB4 502 aaKnown RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 TMEM120AQ9BXJ8 343 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 FGF23Q9GZV9 251 aaPredicted RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 TLNRD1Q9H1K6 362 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 PPA2Q9H2U2 334 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 INTS9Q9NV88 658 aaKnown RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 AURKAIP1Q9NWT8 199 aaPredicted RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 PRPF19Q9UMS4 504 aaKnown RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 POLR1DQ9Y2S0 133 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 NOP16Q9Y3C1 178 aaKnown RBP4.98□□□□□ -1.61
VRK3-220ENST00000600259 MAB21L2Q9Y586 359 aa4.98□□□□□ -1.61
VRK3-220ENST00000600259 MEIOCA2RUB1 952 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 GGT3PA6NGU5 568 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 UNC119BA6NIH7 251 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 CXCR6O00574 342 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 NME4O00746 187 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 BHLHE40O14503 412 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 DIRAS1O95057 198 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 ZNF682O95780 498 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 SERPINA1P01009 418 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 TFF1P04155 84 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 RHCEP18577 417 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 PAX6P26367 422 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 GABRA5P31644 462 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 DDOSTP39656 456 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 RPS27P42677 84 aaKnown RBP4.97□□□□□ -1.61
VRK3-220ENST00000600259 GSSP48637 474 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 GSK3BP49841 420 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 CSNK2BP67870 215 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 MXRA7P84157 204 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 FAM3AP98173 230 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 ACSM1Q08AH1 577 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 DGUOKQ16854 277 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 MICBQ29980 383 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 FAM76BQ5HYJ3 339 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 STUMQ69YW2 141 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 C11orf88Q6PI97 169 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 DNM1P34Q6PK57 102 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 LYPD4Q6UWN0 246 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 DRAM2Q6UX65 266 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 ZNF788Q6ZQV5 615 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 Q6ZTK2 550 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 RRM2BQ7LG56 351 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 Q8N2B8 174 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 FAM86B1Q8N7N1 296 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 WFDC9Q8NEX5 89 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 OR1M1Q8NGA1 313 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 OR5T2Q8NGG2 359 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 OR2AJ1Q8NGZ0 328 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 MRAPQ8TCY5 172 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 LRRC29Q8WV35 223 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 RORBQ92753 470 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 SGK3Q96BR1 496 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 C12orf43Q96C57 262 aaKnown RBP4.97□□□□□ -1.61
VRK3-220ENST00000600259 SSX3Q99909 188 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 SIKE1Q9BRV8 207 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 WDR13Q9H1Z4 485 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 OR52D1Q9H346 318 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 FN3KQ9H479 309 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 RPRD1BQ9NQG5 326 aaKnown RBP4.97□□□□□ -1.61
VRK3-220ENST00000600259 SERTAD4Q9NUC0 356 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 NECAP2Q9NVZ3 263 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 GID8Q9NWU2 228 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 ZNF319Q9P2F9 582 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 ONECUT1Q9UBC0 465 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 DNAJB11Q9UBS4 358 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 KCNG2Q9UJ96 466 aa4.97□□□□□ -1.61
VRK3-220ENST00000600259 CAB39Q9Y376 341 aaPredicted RBP4.97□□□□□ -1.61
VRK3-220ENST00000600259 TET2Q6N021 2002 aaPredicted RBP4.96□□□□□ -1.62
VRK3-220ENST00000600259 ANKRD61A6NGH8 418 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 TVP23AA6NH52 213 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 A6NLC8 198 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 H3BUX3 64 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 M0R1W7 72 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 CDIPTO14735 213 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 NDUFB3O43676 98 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 IDH3BO43837 385 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 CHST1O43916 411 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 RENP00797 406 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 SLC2A1P11166 492 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 NCK1P16333 377 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 EEF1B2P24534 225 aaKnown RBP4.96□□□□□ -1.62
VRK3-220ENST00000600259 DCTDP32321 178 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 PYCR1P32322 319 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 PRKXP51817 358 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 LY6EQ16553 131 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 AANATQ16613 207 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 TEX30Q5JUR7 227 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 VAX1Q5SQQ9 334 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 SLC35F1Q5T1Q4 408 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms