RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 OR2T2Q6IF00 324 aa16.09■□□□□ 0.17
CCDC9-205ENST00000600117 PRSS48Q7RTY5 328 aa16.09■□□□□ 0.17
CCDC9-205ENST00000600117 MRPL21Q7Z2W9 205 aaKnown RBP16.09■□□□□ 0.17
CCDC9-205ENST00000600117 SOX7Q9BT81 388 aa16.09■□□□□ 0.17
CCDC9-205ENST00000600117 RGCCQ9H4X1 137 aa16.09■□□□□ 0.17
CCDC9-205ENST00000600117 TAAR3PQ9P1P4 343 aa16.09■□□□□ 0.17
CCDC9-205ENST00000600117 GTF2A1LQ9UNN4 478 aa16.09■□□□□ 0.17
CCDC9-205ENST00000600117 LRCH1Q9Y2L9 728 aa16.09■□□□□ 0.17
CCDC9-205ENST00000600117 CHD3Q12873 2000 aaKnown RBP16.08■□□□□ 0.16
CCDC9-205ENST00000600117 A0A1B0GTI1 187 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 TRIM64A6NGJ6 449 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 TGM4P49221 684 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 GBX2P52951 348 aaPredicted RBP16.08■□□□□ 0.16
CCDC9-205ENST00000600117 SELENOVP59797 346 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 FAM3AP98173 230 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 MRPL28Q13084 256 aaKnown RBP16.08■□□□□ 0.16
CCDC9-205ENST00000600117 TNK1Q13470 666 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 GFOD2Q3B7J2 385 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 XAF1Q6GPH4 301 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 PGAP1Q75T13 922 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 KLBQ86Z14 1044 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 LRRC75A-AS1Q8N1F1 130 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 GATAD2BQ8WXI9 593 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 CCL19Q99731 98 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 OPA3Q9H6K4 179 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 BABAM2Q9NXR7 383 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 FRRS1LQ9P0K9 344 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 ERGIC3Q9Y282 383 aa16.08■□□□□ 0.16
CCDC9-205ENST00000600117 LSM2Q9Y333 95 aaKnown RBP16.08■□□□□ 0.16
CCDC9-205ENST00000600117 A0A1W2PPW3 197 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 OR4C45A6NMZ5 311 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 IQCF6A8MYZ5 107 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 MYL12BO14950 172 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 LILRA1O75019 489 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 CFL1P23528 166 aaKnown RBP16.07■□□□□ 0.16
CCDC9-205ENST00000600117 EEF1B2P24534 225 aaKnown RBP16.07■□□□□ 0.16
CCDC9-205ENST00000600117 ALDH3B1P43353 468 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 MMP15P51511 669 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 CCR9P51686 369 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 GTF2A1P52655 376 aaPredicted RBP16.07■□□□□ 0.16
CCDC9-205ENST00000600117 WNT4P56705 351 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 SNRPD2P62316 118 aaKnown RBP16.07■□□□□ 0.16
CCDC9-205ENST00000600117 ALKBH1Q13686 389 aaKnown RBP16.07■□□□□ 0.16
CCDC9-205ENST00000600117 OR51E1Q8TCB6 317 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 RPS4Y2Q8TD47 263 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 HAVCR2Q8TDQ0 301 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 GTF3AQ92664 365 aaKnown RBP16.07■□□□□ 0.16
CCDC9-205ENST00000600117 GPR84Q9NQS5 396 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 ZNF391Q9UJN7 358 aa16.07■□□□□ 0.16
CCDC9-205ENST00000600117 SIRT4Q9Y6E7 314 aaPredicted RBP16.07■□□□□ 0.16
CCDC9-205ENST00000600117 CUBNO60494 3623 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 CD300LBA8K4G0 201 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 M0R233 179 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 P2RY10O00398 339 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 TIMM8AO60220 97 aaPredicted RBP16.06■□□□□ 0.16
CCDC9-205ENST00000600117 MRPS14O60783 128 aaKnown RBP16.06■□□□□ 0.16
CCDC9-205ENST00000600117 SELEP16581 610 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 CCL1P22362 96 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 GSK3AP49840 483 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 PPOXP50336 477 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 OR8B8Q15620 311 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 NKPD1Q17RQ9 610 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 KCTD21Q4G0X4 260 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 PRSS57Q6UWY2 283 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 Q6ZR03 302 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 Q6ZSR3 168 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 OR5AS1Q8N127 324 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 PLPP7Q8NBV4 271 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 OR56B2PQ8NGI1 322 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 Q96MF0 132 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 OR5M11Q96RB7 305 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 CACNG6Q9BXT2 260 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 CCDC90BQ9GZT6 254 aa16.06■□□□□ 0.16
CCDC9-205ENST00000600117 USF3Q68DE3 2245 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 GGT3PA6NGU5 568 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 ZSCAN5BA6NJL1 495 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 H7C417 338 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 SMAD7O15105 426 aaKnown RBP16.05■□□□□ 0.16
CCDC9-205ENST00000600117 ACKR3P25106 362 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 CDKN1AP38936 164 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 CHN2P52757 468 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 CDH15P55291 814 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 CDK5R1Q15078 307 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 MOGQ16653 247 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 CCDC58Q4VC31 144 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 OR8G5Q8NG78 346 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 PIGTQ969N2 578 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 MND1Q9BWT6 205 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 DYNLRB1Q9NP97 96 aa16.05■□□□□ 0.16
CCDC9-205ENST00000600117 CGGBP1Q9UFW8 167 aaPredicted RBP16.05■□□□□ 0.16
CCDC9-205ENST00000600117 A0A1B0GWJ7 208 aa16.04■□□□□ 0.16
CCDC9-205ENST00000600117 LOC390937A0A1W2PQ73 354 aa16.04■□□□□ 0.16
CCDC9-205ENST00000600117 OGG1O15527 345 aa16.04■□□□□ 0.16
CCDC9-205ENST00000600117 NAT2P11245 290 aa16.04■□□□□ 0.16
CCDC9-205ENST00000600117 DDOSTP39656 456 aa16.04■□□□□ 0.16
CCDC9-205ENST00000600117 MAP2K4P45985 399 aa16.04■□□□□ 0.16
CCDC9-205ENST00000600117 TBCEQ15813 527 aaPredicted RBP16.04■□□□□ 0.16
CCDC9-205ENST00000600117 ODF4Q2M2E3 257 aa16.04■□□□□ 0.16
CCDC9-205ENST00000600117 RPL22L1Q6P5R6 122 aaKnown RBP16.04■□□□□ 0.16
CCDC9-205ENST00000600117 RDH10Q8IZV5 341 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms