RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 CALB2P22676 271 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 ANOS1P23352 680 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 CFL1P23528 166 aaKnown RBP8.14□□□□□ -1.11
VRK3-216ENST00000599342 GSTT1P30711 240 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 CFHR2P36980 270 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 GNALP38405 381 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 TRIM25Q14258 630 aaKnown RBP8.14□□□□□ -1.11
VRK3-216ENST00000599342 GK3PQ14409 553 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 DEFB112Q30KQ8 113 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 GFOD2Q3B7J2 385 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 PRR31Q5SQ13 230 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 C16orf87Q6PH81 154 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 ZNF826PQ6ZT77 177 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 SHFQ7M4L6 423 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 SLC16A9Q7RTY1 509 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 DPY19L4Q7Z388 723 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 FTMTQ8N4E7 242 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 OR52H1Q8NGJ2 320 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 GATAD2BQ8WXI9 593 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 SPSB4Q96A44 273 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 CCDC124Q96CT7 223 aaKnown RBP8.14□□□□□ -1.11
VRK3-216ENST00000599342 REEP6Q96HR9 211 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 NSL1Q96IY1 281 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 ZNF696Q9H7X3 374 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 SMURF1Q9HCE7 757 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 NOX4Q9NPH5 578 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 TNFRSF19Q9NS68 423 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 VNN3Q9NY84 501 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 DNAJC27Q9NZQ0 273 aa8.14□□□□□ -1.11
VRK3-216ENST00000599342 PRPF19Q9UMS4 504 aaKnown RBP8.14□□□□□ -1.11
VRK3-216ENST00000599342 SOX21Q9Y651 276 aaPredicted RBP8.14□□□□□ -1.11
VRK3-216ENST00000599342 FAM183AA6NL82 134 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 ANXA2P2A6NMY6 339 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 SRRM5B3KS81 715 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 GNGT2O14610 69 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 ECDO95905 644 aaPredicted RBP8.13□□□□□ -1.11
VRK3-216ENST00000599342 CST1P01037 141 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 SFTPBP07988 381 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 H2BFMP0C1H6 154 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 RAP2AP10114 183 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 ZNF121P58317 390 aaPredicted RBP8.13□□□□□ -1.11
VRK3-216ENST00000599342 FAM3AP98173 230 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 PDCD1Q15116 288 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 SNCBQ16143 134 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 MICBQ29980 383 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 LINC01590Q5TEZ4 76 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 TEX36Q5VZQ5 186 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 RUSC1-AS1Q66K80 236 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 FAM57BQ71RH2 274 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 BTN2A1Q7KYR7 527 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 FAM90A1Q86YD7 464 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.13□□□□□ -1.11
VRK3-216ENST00000599342 GCSAMQ8N6F7 178 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 IQCF1Q8N6M8 205 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 SCCPDHQ8NBX0 429 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 GIPC3Q8TF64 312 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 LRRC29Q8WV35 223 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 RNF133Q8WVZ7 376 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 ST8SIA4Q92187 359 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 TMIGD2Q96BF3 282 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 ASB9Q96DX5 294 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 PGAM5Q96HS1 289 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 FAM71F1Q96KD3 344 aaPredicted RBP8.13□□□□□ -1.11
VRK3-216ENST00000599342 WDFY2Q96P53 400 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 NIPSNAP1Q9BPW8 284 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 ABHD6Q9BV23 337 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 PAPOLGQ9BWT3 736 aaKnown RBP8.13□□□□□ -1.11
VRK3-216ENST00000599342 OR10A2Q9H208 303 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 OR51V1Q9H2C8 321 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 RGCCQ9H4X1 137 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 MED20Q9H944 212 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 RNPEPL1Q9HAU8 725 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 BRD7Q9NPI1 651 aa8.13□□□□□ -1.11
VRK3-216ENST00000599342 IGHV3OR15-7A0A075B7D8 119 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 A0A1B0GUS0 222 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 hCG_38984A0A1B0GV85 526 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 ARRDC5A6NEK1 342 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 PRR23D1E9PI22 279 aaPredicted RBP8.12□□□□□ -1.11
VRK3-216ENST00000599342 DVL1O14640 695 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 GLCEO94923 617 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 KNG1P01042 644 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 LYNP07948 512 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 PRR23D2P0DMB1 279 aaPredicted RBP8.12□□□□□ -1.11
VRK3-216ENST00000599342 MMP9P14780 707 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 MUC1P15941 1255 aaPredicted RBP8.12□□□□□ -1.11
VRK3-216ENST00000599342 MDKP21741 143 aaPredicted RBP8.12□□□□□ -1.11
VRK3-216ENST00000599342 OMGP23515 440 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 POU1F1P28069 291 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 NAA10P41227 235 aaPredicted RBP8.12□□□□□ -1.11
VRK3-216ENST00000599342 CSNK2BP67870 215 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 IL5RAQ01344 420 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 MS4A2Q01362 244 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 C11orf91Q3C1V1 193 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 FIP1L1Q6UN15 594 aaKnown RBP8.12□□□□□ -1.11
VRK3-216ENST00000599342 CD300LDQ6UXZ3 194 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 Q6YL49 198 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 RHOUQ7L0Q8 258 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 SLC36A1Q7Z2H8 476 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 CCDC197Q8NCU1 140 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 CSNK2A3Q8NEV1 391 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms