RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SLC29A1Q99808 456 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 PCGF1Q9BSM1 259 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
IRF3-223ENST00000599223 CHIAQ9BZP6 476 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 USE1Q9NZ43 259 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 C3orf80F5H4A9 247 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 DENRO43583 198 aaKnown RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 ENSAO43768 121 aaKnown RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 PTBP3O95758 552 aaKnown RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 RENP00797 406 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 SLC6A6P31641 620 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 PYCR1P32322 319 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 RAG2P55895 527 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 ZNF92Q03936 586 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 SFRP4Q6FHJ7 346 aaPredicted RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 FIP1L1Q6UN15 594 aaKnown RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 ZNF620Q6ZNG0 422 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 PGAP1Q75T13 922 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 LINC00471Q8N535 108 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 CELF2-AS1Q8N7Q2 184 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 BOLLQ8N9W6 283 aaKnown RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 GIPC3Q8TF64 312 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 CYGBQ8WWM9 190 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 TECTBQ96PL2 329 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 NR1H4Q96RI1 486 aaPredicted RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 IFT27Q9BW83 186 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 GABARAPL1Q9H0R8 117 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 C1RLQ9NZP8 487 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 PDP1Q9P0J1 537 aaPredicted RBP12.17□□□□□ -0.46
IRF3-223ENST00000599223 ENOPH1Q9UHY7 261 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 MMP24Q9Y5R2 645 aa12.17□□□□□ -0.46
IRF3-223ENST00000599223 CD300LBA8K4G0 201 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 M0R135 149 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 MELTFP08582 738 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 RPSAP08865 295 aaKnown RBP12.16□□□□□ -0.46
IRF3-223ENST00000599223 IRF2P14316 349 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 GSSP48637 474 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 KRTAP10-3P60369 221 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 ECH1Q13011 328 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 OR8G1Q15617 311 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 MIDNQ504T8 468 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 GLYATL3Q5SZD4 288 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 SLC35F1Q5T1Q4 408 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 GPR157Q5UAW9 335 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 TTC23Q5W5X9 447 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 Q6YL49 198 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 ZNF826PQ6ZT77 177 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
IRF3-223ENST00000599223 FGFRL1Q8N441 504 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 KIR3DL3Q8N743 410 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 CYB561A3Q8NBI2 242 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 OR11L1Q8NGX0 322 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 SPRYD4Q8WW59 207 aaPredicted RBP12.16□□□□□ -0.46
IRF3-223ENST00000599223 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 ZNF799Q96GE5 643 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 ADI1Q9BV57 179 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 EGLN3Q9H6Z9 239 aa12.16□□□□□ -0.46
IRF3-223ENST00000599223 KRCC1Q9NPI7 259 aaPredicted RBP12.16□□□□□ -0.46
IRF3-223ENST00000599223 A0A1B0GW55 424 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 TVP23AA6NH52 213 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 H0YAE9 185 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 LGALS8O00214 317 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
IRF3-223ENST00000599223 CCNB2O95067 398 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 HLA-DQA2P01906 255 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 ALPLP05186 524 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4L2P0CJ85 424 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4L3P0CJ86 424 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4L4P0CJ87 422 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4L5P0CJ88 424 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4L6P0CJ89 424 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4L7P0CJ90 424 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 ANXA8P13928 327 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 OTX1P32242 354 aaPredicted RBP12.15□□□□□ -0.46
IRF3-223ENST00000599223 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.15□□□□□ -0.46
IRF3-223ENST00000599223 MALLQ13021 153 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 PGBD2Q6P3X8 592 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4L9Q6RFH8 374 aaPredicted RBP12.15□□□□□ -0.46
IRF3-223ENST00000599223 OR2AJ1Q8NGZ0 328 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 ERGIC1Q969X5 290 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 CNBD2Q96M20 576 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DDOQ99489 341 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 SIRPDQ9H106 197 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 KRT84Q9NSB2 600 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 RNF7Q9UBF6 113 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 DUX4Q9UBX2 424 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 LYVE1Q9Y5Y7 322 aa12.15□□□□□ -0.46
IRF3-223ENST00000599223 CENPVL3A0A0U1RRI6 287 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 ARRDC5A6NEK1 342 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 ZNF879B4DU55 563 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 ADAM20O43506 726 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 OR10H3O60404 316 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 KNG1P01042 644 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 SLC2A1P11166 492 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 NOS3P29474 1203 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 IFNGR2P38484 337 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 CAPGP40121 348 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 TPTEP56180 551 aa12.14□□□□□ -0.47
IRF3-223ENST00000599223 PPP1R8Q12972 351 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms