RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 C17orf107Q6ZR85 190 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 DHFR2Q86XF0 187 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 ZDHHC21Q8IVQ6 265 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 ZNF511Q8NB15 262 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 SLC37A3Q8NCC5 494 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 OR4F5Q8NH21 305 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 SPTSSAQ969W0 71 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 SLAMF6Q96DU3 332 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 SEH1LQ96EE3 360 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 COPS4Q9BT78 406 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 SEMA6AQ9H2E6 1030 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 MUC13Q9H3R2 512 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 ACOXLQ9NUZ1 547 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 CDH10Q9Y6N8 788 aa10□□□□□ -0.81
SOX2-OT-228ENST00000597828 IGHV1-69DA0A0B4J2H0 117 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 DVL1O14640 695 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 IDH3BO43837 385 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 GMDSO60547 372 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 SOX14O95416 240 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 IGHV1-69P01742 117 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 CRYBA1P05813 215 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 MS4A2Q01362 244 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 CRMP1Q14194 572 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 TRIM25Q14258 630 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 PCK2Q16822 640 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 METTL11BQ5VVY1 283 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 DRAM2Q6UX65 266 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 BTN2A1Q7KYR7 527 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 RHOUQ7L0Q8 258 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 OR52L1Q8NGH7 329 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 OR4Q3Q8NH05 313 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 GATAD2BQ8WXI9 593 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 ST8SIA4Q92187 359 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 SLC7A6OSQ96CW6 309 aaPredicted RBP9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 KCNJ15Q99712 375 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 CITED1Q99966 193 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 SLC22A4Q9H015 551 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 BEX1Q9HBH7 125 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 NOX4Q9NPH5 578 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 CENPMQ9NSP4 180 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 TBC1D23Q9NUY8 699 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 VNN3Q9NY84 501 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 MRPL15Q9P015 296 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 ACTR3BQ9P1U1 418 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 KCNG2Q9UJ96 466 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 LYVE1Q9Y5Y7 322 aa9.99□□□□□ -0.81
SOX2-OT-228ENST00000597828 NOTCH1P46531 2555 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 TRAV38-1A0A0B4J264 116 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 TBX1O43435 398 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 GPR137BO60478 399 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 NDUFA7O95182 113 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 TFF1P04155 84 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 SELLP14151 372 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 ATP6V1B2P21281 511 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 ENTPD1P49961 510 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 KCNJ8Q15842 424 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 CD276Q5ZPR3 534 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 CYP2R1Q6VVX0 501 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 VMO1Q7Z5L0 202 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 C11orf53Q8IXP5 236 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 C10orf67Q8IYJ2 551 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 FAM216BQ8N7L0 139 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 PNLDC1Q8NA58 520 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 SCCPDHQ8NBX0 429 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 OR4C15Q8NGM1 316 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 OR2T4Q8NH00 348 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 LRRC29Q8WV35 223 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 CCDC124Q96CT7 223 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 CLPTM1LQ96KA5 538 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 FAM71F1Q96KD3 344 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 RAB3IPQ96QF0 476 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 IL1RAPQ9NPH3 570 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 ARMC1Q9NVT9 282 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 DNAJB11Q9UBS4 358 aa9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 NOP16Q9Y3C1 178 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-228ENST00000597828 A0A1B0GUS0 222 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 ZNF878C9JN71 531 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 TNFRSF11BO00300 401 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 LHBP01229 141 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 GASTP01350 101 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 ANXA2P07355 339 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 SPI1P17947 270 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 IFNGR2P38484 337 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 CX3CR1P49238 355 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 BPIFB3P59826 476 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 GMFBP60983 142 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 FAM3AP98173 230 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 KLRD1Q13241 179 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 TAF13Q15543 124 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 GFOD2Q3B7J2 385 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 KLHL12Q53G59 568 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 WDR38Q5JTN6 314 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 TEX36Q5VZQ5 186 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 ZNF770Q6IQ21 691 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 LCN8Q6JVE9 175 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 SLC16A9Q7RTY1 509 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 TMEM86BQ8N661 226 aa9.97□□□□□ -0.81
SOX2-OT-228ENST00000597828 OR6K6Q8NGW6 343 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms