RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
TGFB1-202ENST00000597453 PKD1L1Q8TDX9 2849 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 ZNF878C9JN71 531 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 EI24O14681 340 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-202ENST00000597453 PRKYO43930 277 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 LCATP04180 440 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 PRTN3P24158 256 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 OTX1P32242 354 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-202ENST00000597453 ALDH3A2P51648 485 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 EFNB1P98172 346 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 HOXA4Q00056 320 aaPredicted RBP12.66□□□□□ -0.38
TGFB1-202ENST00000597453 ZNF404Q494X3 552 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 KLHL12Q53G59 568 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 SHFQ7M4L6 423 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 C19orf18Q8NEA5 215 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 SPTSSAQ969W0 71 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 RIBC2Q9H4K1 309 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 ORC6Q9Y5N6 252 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
TGFB1-202ENST00000597453 IGHV2-70DA0A0C4DH43 119 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 LRRC30A6NM36 301 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 M0R129 80 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 HKR1P10072 659 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 GATA4P43694 442 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 RAD23AP54725 363 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 RPS7P62081 194 aaKnown RBP12.65□□□□□ -0.38
TGFB1-202ENST00000597453 GNB2P62879 340 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 BAMBIQ13145 260 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 APOFQ13790 326 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 EIF2B1Q14232 305 aaKnown RBP12.65□□□□□ -0.38
TGFB1-202ENST00000597453 LCN1P1Q5VSP4 162 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 LYPD2Q6UXB3 125 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 RHOUQ7L0Q8 258 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 CBR4Q8N4T8 237 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 SLAMF6Q96DU3 332 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
TGFB1-202ENST00000597453 COPS4Q9BT78 406 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 C9orf16Q9BUW7 83 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 MIOXQ9UGB7 285 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.38
TGFB1-202ENST00000597453 C5orf63A6NC05 138 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 CCDC182A6NF36 153 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 M0R135 149 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 SELENOFO60613 162 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 FAM20BO75063 409 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 FSTL3O95633 263 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 CPT2P23786 658 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 POLR2IP36954 125 aaKnown RBP12.64□□□□□ -0.39
TGFB1-202ENST00000597453 CD200P41217 278 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 TPTEP56180 551 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 MALLQ13021 153 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 MPPED2Q15777 294 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 SNAI3Q3KNW1 292 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 NXNL2Q5VZ03 156 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 DRAM2Q6UX65 266 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 BTNL3Q6UXE8 466 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 LRRN1Q6UXK5 716 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 C1orf87Q8N0U7 546 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 TCEANCQ8N8B7 351 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 SGMS2Q8NHU3 365 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 RNF133Q8WVZ7 376 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 TAF15Q92804 592 aaKnown RBP eCLIP12.64□□□□□ -0.39
TGFB1-202ENST00000597453 UPRTQ96BW1 309 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 ZNF799Q96GE5 643 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 TEAD3Q99594 435 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 KCNJ15Q99712 375 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 ABHD6Q9BV23 337 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 MS4A7Q9GZW8 240 aaPredicted RBP12.64□□□□□ -0.39
TGFB1-202ENST00000597453 RNPEPL1Q9HAU8 725 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 UFSP2Q9NUQ7 469 aa12.64□□□□□ -0.39
TGFB1-202ENST00000597453 MEGF8Q7Z7M0 2845 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 TRAV40A0A0B4J280 105 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 PLATP00750 562 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 PPIAL4GP0DN37 164 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 IRF2P14316 349 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 CA6P23280 308 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 SLC15A1P46059 708 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 PITPNBP48739 271 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 GRB2P62993 217 aaKnown RBP12.63□□□□□ -0.39
TGFB1-202ENST00000597453 ZNF92Q03936 586 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 FOXL1Q12952 345 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 AADACL4Q5VUY2 407 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 C9orf139Q6ZV77 190 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 PGAP1Q75T13 922 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 MRPL21Q7Z2W9 205 aaKnown RBP12.63□□□□□ -0.39
TGFB1-202ENST00000597453 CELF2-AS1Q8N7Q2 184 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 OR8B3Q8NGG8 313 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 OR2AE1Q8NHA4 323 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 Q8TCH9 128 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 SPRYD4Q8WW59 207 aaPredicted RBP12.63□□□□□ -0.39
TGFB1-202ENST00000597453 OR8B2Q96RD0 313 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
TGFB1-202ENST00000597453 TOR3AQ9H497 397 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms