RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 OR8B8Q15620 311 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 WDR25Q64LD2 544 aaPredicted RBP12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 BTNL3Q6UXE8 466 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 ZNF841Q6ZN19 808 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 DCDC5Q6ZRR9 648 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 NLRC3Q7RTR2 1065 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 CPOQ8IVL8 374 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 SPSB4Q96A44 273 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 NRBF2Q96F24 287 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 ZNF48Q96MX3 618 aaPredicted RBP12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 NUDT16L1Q9BRJ7 211 aaKnown RBP12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 RASSF4Q9H2L5 321 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 CLN8Q9UBY8 286 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 POMPQ9Y244 141 aa12.98□□□□□ -0.33
PPFIA4-208ENST00000597023 IGHV3OR15-7A0A075B7D8 119 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 hCG_1807616A0A1W2PRN6 198 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 ANKRD30BLA7E2S9 258 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 C22orf46C9J442 243 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 H2BFMP0C1H6 154 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 EGR1P18146 543 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 OPRL1P41146 370 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 RPS7P62081 194 aaKnown RBP12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 UBA52P62987 128 aaKnown RBP12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 CDK5Q00535 292 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 LRRN1Q6UXK5 716 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 RBMS3Q6XE24 437 aaKnown RBP12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 SHFQ7M4L6 423 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 PRSS45Q7RTY3 260 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 TECTBQ96PL2 329 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 MS4A7Q9GZW8 240 aaPredicted RBP12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 TOR3AQ9H497 397 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 MARCH7Q9H992 704 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 CTSZQ9UBR2 303 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 DNAJB9Q9UBS3 223 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 KLHDC2Q9Y2U9 406 aa12.97□□□□□ -0.33
PPFIA4-208ENST00000597023 TRAV40A0A0B4J280 105 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 TCRBV3S1A0A5B6 114 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 TMEM89A2RUT3 159 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 LGALS8O00214 317 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 TIPRLO75663 272 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 GYPAP02724 150 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 LYNP07948 512 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 PSMB10P40306 273 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 CSNK2BP67870 215 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 ELF3P78545 371 aaPredicted RBP12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 SNCBQ16143 134 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 WDR86Q86TI4 376 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 PARP8Q8N3A8 854 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 OR8S1Q8NH09 359 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 TAF15Q92804 592 aaKnown RBP eCLIP12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 DACT3Q96B18 629 aaPredicted RBP12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 PGAM5Q96HS1 289 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 PRRG3Q9BZD7 231 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 NTN4Q9HB63 628 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 RHBDD3Q9Y3P4 386 aa12.96□□□□□ -0.33
PPFIA4-208ENST00000597023 KIR2DS1A0A191URI9 304 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 hCG_38984A0A1B0GV85 526 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 MDFIC2A0A1B0GVS7 189 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 PSMD9O00233 223 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 ADAM20O43506 726 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 FSTL3O95633 263 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 MRPL3P09001 348 aaKnown RBP12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 CFL1P23528 166 aaKnown RBP12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 DDOSTP39656 456 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 GSK3AP49840 483 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 FGF12P61328 243 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 BAMBIQ13145 260 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 C11orf53Q8IXP5 236 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 GCSAMQ8N6F7 178 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 SPERTQ8NA61 448 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 ITFG2Q969R8 447 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 SEH1LQ96EE3 360 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 C1orf147Q96MC9 270 aaPredicted RBP12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 CADM1Q9BY67 442 aaKnown RBP12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 OR10A2Q9H208 303 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 SMURF1Q9HCE7 757 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 C14orf119Q9NWQ9 140 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 ERVK-18Q9QC07 812 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 ENOPH1Q9UHY7 261 aa12.95□□□□□ -0.34
PPFIA4-208ENST00000597023 OOEPA6NGQ2 149 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 DNAJC9-AS1A6NH13 148 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 PHYHO14832 338 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 TNFRSF13BO14836 293 aaPredicted RBP12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 GSC2O15499 205 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 FCN3O75636 299 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 GMFBP60983 142 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 APOFQ13790 326 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 SNAPC1Q16533 368 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 BRD3OSQ6XYD6 125 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 DOK3Q7L591 496 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 FGFRL1Q8N441 504 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 C3orf56Q8N813 242 aa12.94□□□□□ -0.34
PPFIA4-208ENST00000597023 PLPP7Q8NBV4 271 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms