RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SAA4P35542 130 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 TGM4P49221 684 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 EFNB2P52799 333 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 CSNK2BP67870 215 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 GUCA2AQ02747 115 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 KLRD1Q13241 179 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 HERPUD1Q15011 391 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 MICBQ29980 383 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 PNKDQ8N490 385 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 FAM216BQ8N7L0 139 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 FAM86B1Q8N7N1 296 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 SDR9C7Q8NEX9 313 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 OR52J3Q8NH60 311 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 OR5R1Q8NH85 324 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 C8orf46Q8TAG6 207 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 LRRC29Q8WV35 223 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 ZNRF4Q8WWF5 429 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 CFHR4Q92496 578 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 FAM162AQ96A26 154 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 SPSB4Q96A44 273 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 DDOQ99489 341 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 DCTN5Q9BTE1 182 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 PPA2Q9H2U2 334 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 KRCC1Q9NPI7 259 aaPredicted RBP8.16□□□□□ -1.1
LIG1-209ENST00000596104 C14orf119Q9NWQ9 140 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 PRPF19Q9UMS4 504 aaKnown RBP8.16□□□□□ -1.1
LIG1-209ENST00000596104 SIGLEC9Q9Y336 463 aa8.16□□□□□ -1.1
LIG1-209ENST00000596104 FAM32AQ9Y421 112 aaKnown RBP8.16□□□□□ -1.1
LIG1-209ENST00000596104 SLC22A2O15244 555 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 PIN1P1O15428 100 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 IDH3BO43837 385 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 SLC2A1P11166 492 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 SELLP14151 372 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 EEF1B2P24534 225 aaKnown RBP8.15□□□□□ -1.1
LIG1-209ENST00000596104 NOS3P29474 1203 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 PYCR1P32322 319 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 DDOSTP39656 456 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 PRKXP51817 358 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 MZT1Q08AG7 82 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 FAM189A2Q15884 450 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 ATPAF1Q5TC12 328 aaPredicted RBP8.15□□□□□ -1.1
LIG1-209ENST00000596104 STUMQ69YW2 141 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 LYPD4Q6UWN0 246 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 WDR82Q6UXN9 313 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 Q6ZTK2 550 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 SLC36A1Q7Z2H8 476 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 REC114Q7Z4M0 266 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 ZDHHC21Q8IVQ6 265 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 CMTM4Q8IZR5 234 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 LNX2Q8N448 690 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 OR1M1Q8NGA1 313 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 RP9Q8TA86 221 aaKnown RBP8.15□□□□□ -1.1
LIG1-209ENST00000596104 PPP1R35Q8TAP8 253 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 C12orf43Q96C57 262 aaKnown RBP8.15□□□□□ -1.1
LIG1-209ENST00000596104 HOPXQ9BPY8 73 aaPredicted RBP8.15□□□□□ -1.1
LIG1-209ENST00000596104 IFT27Q9BW83 186 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 TLNRD1Q9H1K6 362 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 OPA3Q9H6K4 179 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 FGFR1OP2Q9NVK5 253 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 DNAJB11Q9UBS4 358 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 FOXJ3Q9UPW0 622 aa8.15□□□□□ -1.1
LIG1-209ENST00000596104 NBEAL2Q6ZNJ1 2754 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 MEIOCA2RUB1 952 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 MEGF11A6BM72 1044 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 ANKRD61A6NGH8 418 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 TVP23AA6NH52 213 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 XRCC2O43543 280 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 NDUFB3O43676 98 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 PAHP00439 452 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 ZNF823P16415 610 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 GRK5P34947 590 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 KIR2DS4P43632 304 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 GSSP48637 474 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 UBE2E1P51965 193 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 FAM3AP98173 230 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.14□□□□□ -1.11
LIG1-209ENST00000596104 ACSM1Q08AH1 577 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 SLC35F1Q5T1Q4 408 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 HCP5Q6MZN7 132 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 CRIP3Q6Q6R5 217 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 C1orf122Q6ZSJ8 110 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 SLC16A9Q7RTY1 509 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 DPY19L4Q7Z388 723 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 DCXRQ7Z4W1 244 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 C11orf44Q8N8P7 122 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 CYB561A3Q8NBI2 242 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 BEND2Q8NDZ0 799 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 OR8S1Q8NH09 359 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 C17orf50Q8WW18 174 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 AJUBAQ96IF1 538 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 KCNJ15Q99712 375 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 COPS4Q9BT78 406 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 NSRP1Q9H0G5 558 aaKnown RBP8.14□□□□□ -1.11
LIG1-209ENST00000596104 PPP1R3EQ9H7J1 279 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 DCAF13Q9NV06 445 aaKnown RBP8.14□□□□□ -1.11
LIG1-209ENST00000596104 ABCD2Q9UBJ2 740 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 COMMD3-BMI1R4GMX3 469 aa8.14□□□□□ -1.11
LIG1-209ENST00000596104 hCG_38984A0A1B0GV85 526 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 ANKRD30BLA7E2S9 258 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 H3BUX3 64 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms