RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 KCTD18Q6PI47 426 aaPredicted RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 PEG10Q86TG7 708 aaKnown RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 GLCCI1Q86VQ1 547 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 ZNF679Q8IYX0 411 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 OR51G2Q8NGK0 314 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 OR51F2Q8NH61 342 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 FAM81AQ8TBF8 368 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 ASB17Q8WXJ9 295 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 PPP1R14AQ96A00 147 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 EME1Q96AY2 570 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 RAB39BQ96DA2 213 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 BEX2Q9BXY8 128 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 SLC22A4Q9H015 551 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 NIPAL2Q9H841 368 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 SP140LQ9H930 580 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM165Q9HC07 324 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 UFSP2Q9NUQ7 469 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 HIF1ANQ9NWT6 349 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 CLN6Q9NWW5 311 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 H2AFY2Q9P0M6 372 aaPredicted RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 LPAR3Q9UBY5 353 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 WARS2Q9UGM6 360 aaKnown RBP9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 RHBDD3Q9Y3P4 386 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 TMEM14AQ9Y6G1 99 aa9.22□□□□□ -0.93
SHKBP1-206ENST00000595523 TRAV20A0A0B4J274 112 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 CEACAM18A8MTB9 384 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF254O75437 659 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 AVPP01185 164 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 IGLV3-1P01715 115 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 DCTDP32321 178 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 DDOSTP39656 456 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 MDH2P40926 338 aaKnown RBP9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF684Q5T5D7 378 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF322Q6U7Q0 402 aaPredicted RBP9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 PLEKHG7Q6ZR37 379 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 C1orf229Q6ZS94 237 aaPredicted RBP9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 C11orf53Q8IXP5 236 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 C10orf67Q8IYJ2 551 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 C19orf18Q8NEA5 215 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 ERGIC1Q969X5 290 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 MNTQ99583 582 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 APOL4Q9BPW4 351 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 MROQ9BYG7 248 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 FGF23Q9GZV9 251 aaPredicted RBP9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 RGCCQ9H4X1 137 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 PATZ1Q9HBE1 687 aaKnown RBP9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 AASSQ9UDR5 926 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 MRM2Q9UI43 246 aaKnown RBP9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 TENM1Q9UKZ4 2725 aa9.21□□□□□ -0.94
SHKBP1-206ENST00000595523 A0A0U1RQV5 110 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 TMEM269A0A1B0GVZ9 245 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 A0A1W2PQL4 384 aaPredicted RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 ANKRD30BLA7E2S9 258 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF670-ZNF695F2Z2N8 137 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 DLGAP1O14490 977 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 ENTPD6O75354 484 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 FSTL3O95633 263 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 TTRP02766 147 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 SRD5A1P18405 259 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 GABRB1P18505 474 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 CFL1P23528 166 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 RIDAP52758 137 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 CDC42P60953 191 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 SNRPGP62308 76 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 LCN2P80188 198 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF404Q494X3 552 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 SLC25A30Q5SVS4 291 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 ZNF826PQ6ZT77 177 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 KRT74Q7RTS7 529 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 KLBQ86Z14 1044 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 SPICQ8N5J4 248 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 SPERTQ8NA61 448 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 PLPP7Q8NBV4 271 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 TRUB1Q8WWH5 349 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 ITPKCQ96DU7 683 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 TBX5Q99593 518 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 TMEM246Q9BRR3 403 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 C9orf16Q9BUW7 83 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 PAPOLGQ9BWT3 736 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 TMPRSS13Q9BYE2 586 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 PBOV1Q9GZY1 135 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 NUFIP1Q9UHK0 495 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 IKZF2Q9UKS7 526 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 NOP16Q9Y3C1 178 aaKnown RBP9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 ORC6Q9Y5N6 252 aa9.2□□□□□ -0.94
SHKBP1-206ENST00000595523 PPIAL4EA0A075B759 164 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ACOD1A6NK06 481 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 LRRC30A6NM36 301 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 A8MXK9 166 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ANKRD65E5RJM6 399 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 PPIAL4DF5H284 164 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 J3QRE1 110 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 PHYHO14832 338 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 CST4P01036 141 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 GRPP07492 148 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 WNT2P09544 360 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 PPIAL4FP0DN26 164 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 ANPEPP15144 967 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 HNF1AP20823 631 aa9.19□□□□□ -0.94
SHKBP1-206ENST00000595523 THBS2P35442 1172 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms