RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ZSCAN4Q8NAM6 433 aaPredicted RBP13.46□□□□□ -0.25
LIG1-205ENST00000593425 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 OR2T4Q8NH00 348 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 GNPDA2Q8TDQ7 276 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 LRRC29Q8WV35 223 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 SLAMF6Q96DU3 332 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 CCL13Q99616 98 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 KCNJ15Q99712 375 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 CNTD2Q9H8S5 307 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 TCF7L1Q9HCS4 588 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 CENPMQ9NSP4 180 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 C14orf119Q9NWQ9 140 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 KPTNQ9Y664 436 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 CDH10Q9Y6N8 788 aa13.46□□□□□ -0.25
LIG1-205ENST00000593425 SLC22A31A6NKX4 558 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.45□□□□□ -0.26
LIG1-205ENST00000593425 GMNNO75496 209 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 FABP3P05413 133 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 SPARCP09486 303 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 IFNGR2P38484 337 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 DLX1P56177 255 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 CSNK2BP67870 215 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 C11orf91Q3C1V1 193 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 WDR38Q5JTN6 314 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 FAM216BQ8N7L0 139 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 SLC37A3Q8NCC5 494 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 LY6G5BQ8NDX9 201 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 OR9Q2Q8NGE9 314 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 OR4C15Q8NGM1 316 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 OR8D4Q8NGM9 314 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 SPSB4Q96A44 273 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 SEH1LQ96EE3 360 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 MYLK2Q9H1R3 596 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 PPP1R3EQ9H7J1 279 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 SIRT7Q9NRC8 400 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 ZNRD1Q9P1U0 126 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 ONECUT1Q9UBC0 465 aa13.45□□□□□ -0.26
LIG1-205ENST00000593425 A0A1B0GVI7 797 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 XRCC2O43543 280 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 GYPBP06028 91 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 AMY2BP19961 511 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 MSX2P35548 267 aaPredicted RBP13.44□□□□□ -0.26
LIG1-205ENST00000593425 ENTPD1P49961 510 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 FAM3AP98173 230 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 MZT1Q08AG7 82 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 WDR82Q6UXN9 313 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 GDPGP1Q6ZNW5 385 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 SLC16A9Q7RTY1 509 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 ZNF511Q8NB15 262 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 OR1M1Q8NGA1 313 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 OR52L1Q8NGH7 329 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 OR8S1Q8NH09 359 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 MCUR1Q96AQ8 359 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 CMTM5Q96DZ9 223 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 BTBD10Q9BSF8 475 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 DPAGT1Q9H3H5 408 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 OPA3Q9H6K4 179 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 MAGEL2Q9UJ55 1249 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 FAM96BQ9Y3D0 163 aa13.44□□□□□ -0.26
LIG1-205ENST00000593425 A0A1W2PRD5 423 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 A0A1W2PRF3 423 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 A0A1W2PRM7 423 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 ANKRD30BLA7E2S9 258 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 ZNF878C9JN71 531 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 RNASEK-C17orf49H0YIS7 233 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 ACOT8O14734 319 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 TBX1O43435 398 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 SELLP14151 372 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 MUC1P15941 1255 aaPredicted RBP13.43□□□□□ -0.26
LIG1-205ENST00000593425 KLRD1Q13241 179 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 CRMP1Q14194 572 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 TAF13Q15543 124 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 MICBQ29980 383 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 DHRS7BQ6IAN0 325 aaPredicted RBP13.43□□□□□ -0.26
LIG1-205ENST00000593425 METAP1DQ6UB28 335 aaPredicted RBP13.43□□□□□ -0.26
LIG1-205ENST00000593425 DPY19L4Q7Z388 723 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 Q8N7P7 452 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 C16orf95Q9H693 158 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 IL1RAPQ9NPH3 570 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 ZNF446Q9NWS9 450 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 DNAJB11Q9UBS4 358 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 VPREB3Q9UKI3 123 aa13.43□□□□□ -0.26
LIG1-205ENST00000593425 PRPF19Q9UMS4 504 aaKnown RBP13.43□□□□□ -0.26
LIG1-205ENST00000593425 hCG_38984A0A1B0GV85 526 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 ZNF593O00488 134 aaPredicted RBP13.42□□□□□ -0.26
LIG1-205ENST00000593425 ARPC2O15144 300 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 ANXA2P07355 339 aaKnown RBP13.42□□□□□ -0.26
LIG1-205ENST00000593425 FBP1P09467 338 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 CLUP10909 449 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 HSD17B1P14061 328 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 FMO3P31513 532 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 GRK5P34947 590 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 DDOSTP39656 456 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 CX3CR1P49238 355 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 IKZF1Q13422 519 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 TIGD6Q17RP2 521 aa13.42□□□□□ -0.26
LIG1-205ENST00000593425 KLHL12Q53G59 568 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms