RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CD200P41217 278 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 MAP2K3P46734 347 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 DVL1P1P54792 670 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-227ENST00000591849 PSMA6P60900 246 aaKnown RBP8.5□□□□□ -1.05
BRCA1-227ENST00000591849 LMO4P61968 165 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 BTG1P62324 171 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 EFNB1P98172 346 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 TMED1Q13445 227 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 ZSCAN26Q16670 478 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 CR1LQ2VPA4 569 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 PRAMEF6Q5VXH4 476 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 MEDAGQ5VYS4 303 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 FAHD2BQ6P2I3 314 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-227ENST00000591849 KCTD8Q6ZWB6 473 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 MUC20Q8N307 709 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-227ENST00000591849 GALNT4Q8N4A0 578 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 CELF2-AS1Q8N7Q2 184 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 YIPF7Q8N8F6 280 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 OR8B12Q8NGG6 310 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 OR2T27Q8NH04 317 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 PIGCQ92535 297 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 SPSB4Q96A44 273 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 TMEM186Q96B77 213 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 FAHD2AQ96GK7 314 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 HRASLS5Q96KN8 279 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 Q96MT0 163 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 MICU1Q9BPX6 476 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 SOX7Q9BT81 388 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 PAPOLGQ9BWT3 736 aaKnown RBP8.5□□□□□ -1.05
BRCA1-227ENST00000591849 ADGRL4Q9HBW9 690 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 DCAF16Q9NXF7 216 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 HAO2Q9NYQ3 351 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF391Q9UJN7 358 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 COPS3Q9UNS2 423 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 PPIAL4EA0A075B759 164 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 TRAV20A0A0B4J274 112 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 FAM157AC9JC47 383 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 PPIAL4DF5H284 164 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 LOC110117498-PIK3R3F6TDL0 507 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 MPZL2O60487 215 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 FAM20BO75063 409 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 ENTPD6O75354 484 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 FOXH1O75593 365 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 RPP14O95059 124 aaKnown RBP8.49□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF205O95201 554 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 APOL3O95236 402 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 IGHV2-5P01817 119 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 PPIAL4FP0DN26 164 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 DCTDP32321 178 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 MMP16P51512 607 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 IL5RAQ01344 420 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 ROM1Q03395 351 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 EGR3Q06889 387 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 MAB21L1Q13394 359 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 RCN1Q15293 331 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 LRRC36Q1X8D7 754 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 TMEM155Q4W5P6 130 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 FAM120AOSQ5T036 256 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 BCL2L15Q5TBC7 163 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 PLEKHG7Q6ZR37 379 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 FAM220AQ7Z4H9 259 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 LRRC28Q86X40 367 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-227ENST00000591849 DVL3Q92997 716 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-227ENST00000591849 UBE2FQ969M7 185 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 RNFT2Q96EX2 444 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 FAM71F1Q96KD3 344 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-227ENST00000591849 MYCBPQ99417 103 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-227ENST00000591849 SLC29A1Q99808 456 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 ADI1Q9BV57 179 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 PBOV1Q9GZY1 135 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 ABCB9Q9NP78 766 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 HIF1ANQ9NWT6 349 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 C1orf123Q9NWV4 160 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF319Q9P2F9 582 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 RNF7Q9UBF6 113 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 RHBDD3Q9Y3P4 386 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 PCDHGB1Q9Y5G3 927 aa8.49□□□□□ -1.05
BRCA1-227ENST00000591849 CR1P17927 2039 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 LOC100130705A0A1B0GUX0 176 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 hCG_38984A0A1B0GV85 526 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 A0A1W2PQL4 384 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 DAPL1A0PJW8 107 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 METTL15A6NJ78 407 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF850A8MQ14 1090 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 ANKRD65E5RJM6 399 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MAGEB4O15481 346 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 PLPP2O43688 288 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MTRF1O75570 445 aaKnown RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 IGHV2-70P01814 119 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 ATP6V1B1P15313 513 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 SRD5A1P18405 259 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 ANOS1P23352 680 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 GATA4P43694 442 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MTNR1AP48039 350 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 SNRPGP62308 76 aaKnown RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 LCN2P80188 198 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms