RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 KIR3DL2P43630 455 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 NANOS3P60323 173 aaKnown RBP16.3■□□□□ 0.2
DDX39A-214ENST00000590556 TSTQ16762 297 aaKnown RBP16.3■□□□□ 0.2
DDX39A-214ENST00000590556 CSNK2A3Q8NEV1 391 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 OR2Z1Q8NG97 314 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 OR52N1Q8NH53 320 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 GATAD2BQ8WXI9 593 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 SGCDQ92629 289 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 FAM71F1Q96KD3 344 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-214ENST00000590556 SOX7Q9BT81 388 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 NKIRAS2Q9NYR9 191 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 MRPL15Q9P015 296 aaKnown RBP16.3■□□□□ 0.2
DDX39A-214ENST00000590556 FRRS1LQ9P0K9 344 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 ERGIC3Q9Y282 383 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 MYO9AB2RTY4 2548 aa16.3■□□□□ 0.2
DDX39A-214ENST00000590556 ANKRD30BLA7E2S9 258 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 MYL12BO14950 172 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 TPD52L2O43399 206 aaKnown RBP16.29■□□□□ 0.2
DDX39A-214ENST00000590556 RGS10O43665 173 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 SSX4O60224 188 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 MTRF1O75570 445 aaKnown RBP16.29■□□□□ 0.2
DDX39A-214ENST00000590556 LY6HO94772 140 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 ATP6V1B1P15313 513 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 CA6P23280 308 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 TNFSF4P23510 183 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 EEF1B2P24534 225 aaKnown RBP16.29■□□□□ 0.2
DDX39A-214ENST00000590556 MAGEB1P43366 347 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 MAP2K3P46734 347 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 CCR9P51686 369 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 CCL8P80075 99 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 ALKBH1Q13686 389 aaKnown RBP16.29■□□□□ 0.2
DDX39A-214ENST00000590556 OR8B8Q15620 311 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 FAM209AQ5JX71 171 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 RNLSQ5VYX0 342 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 KLBQ86Z14 1044 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 ITFG2Q969R8 447 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 ELMOD3Q96FG2 381 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 CDCA4Q9BXL8 241 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 SLC22A4Q9H015 551 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 DECR2Q9NUI1 292 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 BABAM2Q9NXR7 383 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 CSMD1Q96PZ7 3565 aa16.29■□□□□ 0.2
DDX39A-214ENST00000590556 A0A1B0GTI1 187 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 A0A1B0GVI7 797 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 LOC390937A0A1W2PQ73 354 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 UBCP0CG48 685 aaKnown RBP16.28■□□□□ 0.2
DDX39A-214ENST00000590556 ACKR3P25106 362 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 TGM4P49221 684 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 TNFAIP6P98066 277 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-214ENST00000590556 TNK1Q13470 666 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 DOK3Q7L591 496 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 FTMTQ8N4E7 242 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 NANOGP1Q8N7R0 232 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 SEMA6DQ8NFY4 1073 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 EGLN1Q9GZT9 426 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 CXXC4Q9H2H0 198 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 NOP16Q9Y3C1 178 aaKnown RBP16.28■□□□□ 0.2
DDX39A-214ENST00000590556 LRRC42Q9Y546 428 aa16.28■□□□□ 0.2
DDX39A-214ENST00000590556 MAP1AP78559 2803 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-214ENST00000590556 PRRC2AP48634 2157 aaKnown RBP16.27■□□□□ 0.2
DDX39A-214ENST00000590556 A0A1B0GWJ7 208 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 OR4C45A6NMZ5 311 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 H0YL77 283 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 MLNRO43193 412 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 SYT7O43581 403 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 DHRS3O75911 302 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 NCR1O76036 304 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 HPXP02790 462 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 HLA-DPB1P04440 258 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 CD55P08174 381 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 CCL1P22362 96 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 GTF2A1P52655 376 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-214ENST00000590556 OR8G1Q15617 311 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 CCDC58Q4VC31 144 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 Q5PR19 223 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 TMEM244Q5VVB8 128 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 RPL22L1Q6P5R6 122 aaKnown RBP16.27■□□□□ 0.2
DDX39A-214ENST00000590556 RDH10Q8IZV5 341 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 PLPP7Q8NBV4 271 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 ZNF485Q8NCK3 441 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 OR10AD1Q8NGE0 317 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 UBASH3BQ8TF42 649 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 MND1Q9BWT6 205 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 YTHDF1Q9BYJ9 559 aaKnown RBP16.27■□□□□ 0.2
DDX39A-214ENST00000590556 CCDC90BQ9GZT6 254 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 TRIM36Q9NQ86 728 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 RHBDD3Q9Y3P4 386 aa16.27■□□□□ 0.2
DDX39A-214ENST00000590556 CHD3Q12873 2000 aaKnown RBP16.27■□□□□ 0.2
DDX39A-214ENST00000590556 TRBV2A0A0J9YWF9 115 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 LOC107986453A0A1B0GWG9 222 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 H3BSH0 61 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 GMDSO60547 372 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 MT-ND2P03891 347 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 DAOP14920 347 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 GNALP38405 381 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 WNT4P56705 351 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 RIPPLY1Q0D2K3 151 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 SHEQ5VZ18 495 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 PRSS57Q6UWY2 283 aa16.26■□□□□ 0.19
DDX39A-214ENST00000590556 PRSS48Q7RTY5 328 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms