RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ZNF121P58317 390 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-211ENST00000590499 MAB21L1Q13394 359 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 APOFQ13790 326 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 ZMYND11Q15326 602 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF124Q15973 351 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF181Q2M3W8 571 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 TMEM155Q4W5P6 130 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 AADACL4Q5VUY2 407 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 IL17RELQ6ZVW7 336 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 SLC16A9Q7RTY1 509 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 GLCCI1Q86VQ1 547 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 OR51F2Q8NH61 342 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 TMEM186Q96B77 213 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 RAB39BQ96DA2 213 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 TEAD3Q99594 435 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 OSBPL10Q9BXB5 764 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 GABARAPL3Q9BY60 117 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 OPA3Q9H6K4 179 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 G6PC2Q9NQR9 355 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 MRPL15Q9P015 296 aaKnown RBP9.42□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF319Q9P2F9 582 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 STAB1Q9NY15 2570 aa9.42□□□□□ -0.9
SMAD4-211ENST00000590499 hCG_38984A0A1B0GV85 526 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 EBAG9O00559 213 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 APOC1P02654 83 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 ANXA2P07355 339 aaKnown RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 CA6P23280 308 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 HSD11B1P28845 292 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 POLR2IP36954 125 aaKnown RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 RPS7P62081 194 aaKnown RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 BTG1P62324 171 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 FAM3AP98173 230 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 NXNL2Q5VZ03 156 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 BCDIN3DQ7Z5W3 292 aaKnown RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 PEG10Q86TG7 708 aaKnown RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 MOGAT3Q86VF5 341 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 LRRC28Q86X40 367 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 TCEANCQ8N8B7 351 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 OR56B2PQ8NGI1 322 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 OR52H1Q8NGJ2 320 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 ZNF420Q8TAQ5 688 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 TMEM163Q8TC26 289 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 Q8TCH9 128 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 SPRYD4Q8WW59 207 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-211ENST00000590499 SGK3Q96BR1 496 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 MISP3Q96FF7 219 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 PKP2Q99959 881 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 GAL3ST1Q99999 423 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 PRRG3Q9BZD7 231 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 YIPF3Q9GZM5 350 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 SLC22A4Q9H015 551 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 LPAR2Q9HBW0 351 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 HIF1ANQ9NWT6 349 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 DNAJC27Q9NZQ0 273 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 ENOPH1Q9UHY7 261 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 U3KQE9 123 aa9.41□□□□□ -0.9
SMAD4-211ENST00000590499 TRAV20A0A0B4J274 112 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 IGHV3-64DA0A0J9YX35 117 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 ISPDA4D126 451 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 GGT3PA6NGU5 568 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 SAC3D1A6NKF1 404 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 E9PQ18 207 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 F5H0A9 414 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-211ENST00000590499 PLPP2O43688 288 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 GMDSO60547 372 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 FSTL3O95633 263 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 ALPLP05186 524 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 MRPL3P09001 348 aaKnown RBP9.4□□□□□ -0.9
SMAD4-211ENST00000590499 H2BFMP0C1H6 154 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 SRD5A1P18405 259 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 HNF1AP20823 631 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 PCMT1P22061 227 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 THBS2P35442 1172 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 DDOSTP39656 456 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 HCCSP53701 268 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 ROM1Q03395 351 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 TIGD6Q17RP2 521 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 LCN1P1Q5VSP4 162 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 ZFP1Q6P2D0 407 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 DEGS2Q6QHC5 323 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 LRRN1Q6UXK5 716 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 FAM57BQ71RH2 274 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 MEPCEQ7L2J0 689 aaKnown RBP9.4□□□□□ -0.9
SMAD4-211ENST00000590499 WFDC3Q8IUB2 231 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 SPICQ8N5J4 248 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 RFLNBQ8N5W9 214 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 THEM6Q8WUY1 208 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 ERGIC1Q969X5 290 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 REEP6Q96HR9 211 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 RBM4BQ9BQ04 359 aaKnown RBP9.4□□□□□ -0.9
SMAD4-211ENST00000590499 ADAT1Q9BUB4 502 aaKnown RBP9.4□□□□□ -0.9
SMAD4-211ENST00000590499 RGCCQ9H4X1 137 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 SP140LQ9H930 580 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 ADGRL4Q9HBW9 690 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 HAO2Q9NYQ3 351 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 COPS3Q9UNS2 423 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 NOP16Q9Y3C1 178 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms