RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 UFD1Q92890 307 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 PDCD1LG2Q9BQ51 273 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 VCX3AQ9NNX9 186 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 HHLA2Q9UM44 414 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 SIRT4Q9Y6E7 314 aaPredicted RBP11.65□□□□□ -0.54
VMP1-210ENST00000589823 PLCE1Q9P212 2302 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 HECTD1Q9ULT8 2610 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 ROS1P08922 2347 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 A0A1B0GTI1 187 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 ANKRD30BLA7E2S9 258 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 H3BSH0 61 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 PLPP2O43688 288 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 ZFPL1O95159 310 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 CD8AP01732 235 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 RAF1P04049 648 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 PCMT1P22061 227 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 CCL1P22362 96 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 PPOXP50336 477 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 ZNF81P51508 661 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 MMP15P51511 669 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 RIPPLY1Q0D2K3 151 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 MLLT11Q13015 90 aaPredicted RBP11.64□□□□□ -0.55
VMP1-210ENST00000589823 TMEM255AQ5JRV8 349 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 KCTD8Q6ZWB6 473 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 PLPP7Q8NBV4 271 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 RPS4Y2Q8TD47 263 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 NRGNQ92686 78 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 PIGTQ969N2 578 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 MGLLQ99685 303 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 SOX7Q9BT81 388 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 CACNG6Q9BXT2 260 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 SLC22A4Q9H015 551 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 MS4A5Q9H3V2 200 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 CXorf56Q9H5V9 222 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 PLEKHA1Q9HB21 404 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 TMEM100Q9NV29 134 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 ZNF281Q9Y2X9 895 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 NOP16Q9Y3C1 178 aaKnown RBP11.64□□□□□ -0.55
VMP1-210ENST00000589823 V9GYS6 101 aa11.64□□□□□ -0.55
VMP1-210ENST00000589823 CRYBG3Q68DQ2 2970 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 RAI1Q7Z5J4 1906 aaPredicted RBP11.63□□□□□ -0.55
VMP1-210ENST00000589823 DHRS7CA6NNS2 312 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 CD1AP06126 327 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 ERCC1P07992 297 aaPredicted RBP11.63□□□□□ -0.55
VMP1-210ENST00000589823 DNASE1P24855 282 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 ACKR3P25106 362 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 PSMB9P28065 219 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 GNALP38405 381 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 GPR50Q13585 617 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 UBE2UQ5VVX9 321 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 OR13C3Q8NGS6 347 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 OR14K1Q8NGZ2 314 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 OR13G1Q8NGZ3 307 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 GPR148Q8TDV2 347 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 TSEN15Q8WW01 171 aaKnown RBP11.63□□□□□ -0.55
VMP1-210ENST00000589823 GHSRQ92847 366 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 DIRC2Q96SL1 478 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 VRK1Q99986 396 aaPredicted RBP11.63□□□□□ -0.55
VMP1-210ENST00000589823 LIME1Q9H400 295 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 MSL2Q9HCI7 577 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 MRPL15Q9P015 296 aaKnown RBP11.63□□□□□ -0.55
VMP1-210ENST00000589823 ENPP5Q9UJA9 477 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 ZDHHC8Q9ULC8 765 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 PIGLQ9Y2B2 252 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 DCHS2Q6V1P9 2916 aa11.63□□□□□ -0.55
VMP1-210ENST00000589823 HRNRQ86YZ3 2850 aaPredicted RBP11.63□□□□□ -0.55
VMP1-210ENST00000589823 BAHCC1Q9P281 2608 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 ZNF816-ZNF321PA0A0X1KG74 233 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 MAGEA13PA6NCF6 341 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 C17orf100A8MU93 164 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 SPRY3O43610 288 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 NAT2P11245 290 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 ZNF20P17024 532 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 CD53P19397 219 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 TNFSF4P23510 183 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 CDKN1AP38936 164 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 TNK1Q13470 666 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 TPBGQ13641 420 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 DOC2BQ14184 412 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 OR8G1Q15617 311 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 NEDD8Q15843 81 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 ZBTB37Q5TC79 503 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 Q6ZSR3 168 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 OR10AC1Q8NH08 325 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 C10orf35Q96D05 121 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 TRMT61AQ96FX7 289 aaKnown RBP11.62□□□□□ -0.55
VMP1-210ENST00000589823 PGLYRP3Q96LB9 341 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 LURAP1Q96LR2 239 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 OPALINQ96PE5 141 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 SLC30A2Q9BRI3 323 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 PAPOLGQ9BWT3 736 aaKnown RBP11.62□□□□□ -0.55
VMP1-210ENST00000589823 RAB1BQ9H0U4 201 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 TPK1Q9H3S4 243 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 ABCB9Q9NP78 766 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 DHDHQ9UQ10 334 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 PLEKHA6Q9Y2H5 1048 aa11.62□□□□□ -0.55
VMP1-210ENST00000589823 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.61□□□□□ -0.55
VMP1-210ENST00000589823 ZSCAN5BA6NJL1 495 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms