RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 FGFR1OP2Q9NVK5 253 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 ABCD2Q9UBJ2 740 aa11.28□□□□□ -0.6
CLPTM1-208ENST00000588274 BHLHE40O14503 412 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 GPR37O15354 613 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 GRPP07492 148 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC2A1P11166 492 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 TGM4P49221 684 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 SF3A3Q12874 501 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 HERPUD1Q15011 391 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC36A3Q495N2 470 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 KLHL12Q53G59 568 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 DRAM2Q6UX65 266 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 CYP4Z1Q86W10 505 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 RNPEPL1Q9HAU8 725 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 ONECUT1Q9UBC0 465 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 KCNG2Q9UJ96 466 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 PRPF19Q9UMS4 504 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 AP3M1Q9Y2T2 418 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 CAPN7Q9Y6W3 813 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 COMMD3-BMI1R4GMX3 469 aa11.27□□□□□ -0.61
CLPTM1-208ENST00000588274 hCG_1807616A0A1W2PRN6 198 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 GGT3PA6NGU5 568 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 A6NLC8 198 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC22A2O15244 555 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 PIN1P1O15428 100 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 RENP00797 406 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 TFF1P04155 84 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 MUC1P15941 1255 aaPredicted RBP11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 NOS3P29474 1203 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC6A6P31641 620 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 PYCR1P32322 319 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 GSSP48637 474 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 PRSS45Q7RTY3 260 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 ZDHHC21Q8IVQ6 265 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 GALNT4Q8N4A0 578 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 SPERTQ8NA61 448 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 OR1M1Q8NGA1 313 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 OR2AJ1Q8NGZ0 328 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 OR52J3Q8NH60 311 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 LRRC29Q8WV35 223 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 FGF23Q9GZV9 251 aaPredicted RBP11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 PPA2Q9H2U2 334 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 TOR3AQ9H497 397 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 FOXJ3Q9UPW0 622 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 AURKCQ9UQB9 309 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 FAM96BQ9Y3D0 163 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
CLPTM1-208ENST00000588274 hCG_38984A0A1B0GV85 526 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 TVP23AA6NH52 213 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 ALX3O95076 343 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 TROVE2P10155 538 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 GABRA5P31644 462 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 MXRA7P84157 204 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 FAM3AP98173 230 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 GUCA2AQ02747 115 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 ATPAF1Q5TC12 328 aaPredicted RBP11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 SLC16A9Q7RTY1 509 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 LNX2Q8N448 690 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 BEND2Q8NDZ0 799 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 OR5R1Q8NH85 324 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 RP9Q8TA86 221 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 WIPF2Q8TF74 440 aaPredicted RBP11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 SPTSSAQ969W0 71 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 C12orf43Q96C57 262 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 IFT27Q9BW83 186 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 DCAF13Q9NV06 445 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 C14orf119Q9NWQ9 140 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 DNAJB11Q9UBS4 358 aa11.25□□□□□ -0.61
CLPTM1-208ENST00000588274 H3BUX3 64 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 CHST1O43916 411 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 HLA-DQA2P01906 255 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 UBE2E1P51965 193 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 FAM189A2Q15884 450 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 DGUOKQ16854 277 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 MICBQ29980 383 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 HACD2Q6Y1H2 254 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 DCXRQ7Z4W1 244 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 CYB561A3Q8NBI2 242 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 OR8D4Q8NGM9 314 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 FAM162AQ96A26 154 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 ITPKCQ96DU7 683 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 WDR13Q9H1Z4 485 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 ZNF319Q9P2F9 582 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 CAB39Q9Y376 341 aaPredicted RBP11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 MAB21L2Q9Y586 359 aa11.24□□□□□ -0.61
CLPTM1-208ENST00000588274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 BTBD17A6NE02 478 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 GSTA4O15217 222 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 XRCC2O43543 280 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 IDH3BO43837 385 aa11.23□□□□□ -0.61
CLPTM1-208ENST00000588274 COX4I1P13073 169 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms