RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 LNX2Q8N448 690 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 PROKR2Q8NFJ6 384 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 OR2T4Q8NH00 348 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 OR8S1Q8NH09 359 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 GNPDA2Q8TDQ7 276 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 SPSB4Q96A44 273 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 PYURFQ96I23 114 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 CCL13Q99616 98 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 KCNJ15Q99712 375 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 COPS4Q9BT78 406 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
DNMT1-213ENST00000587604 ZNF816-ZNF321PA0A0X1KG74 233 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 A0A1B0GW55 424 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 ANKRD30BLA7E2S9 258 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 XRCC2O43543 280 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 SEMG1P04279 462 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4L2P0CJ85 424 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4L3P0CJ86 424 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4L4P0CJ87 422 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4L5P0CJ88 424 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4L6P0CJ89 424 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4L7P0CJ90 424 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 SLC2A1P11166 492 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
DNMT1-213ENST00000587604 EEF1B2P24534 225 aaKnown RBP11.55□□□□□ -0.56
DNMT1-213ENST00000587604 PRKXP51817 358 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 TSPAN31Q12999 210 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 TAF13Q15543 124 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 PCK2Q16822 640 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 WDR38Q5JTN6 314 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
DNMT1-213ENST00000587604 SLC36A1Q7Z2H8 476 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 ZDHHC21Q8IVQ6 265 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 FGFRL1Q8N441 504 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 CYB561A3Q8NBI2 242 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 FAM110DQ8TAY7 271 aaPredicted RBP11.55□□□□□ -0.56
DNMT1-213ENST00000587604 LRRC29Q8WV35 223 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 ZNRF4Q8WWF5 429 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 C12orf43Q96C57 262 aaKnown RBP11.55□□□□□ -0.56
DNMT1-213ENST00000587604 CCDC134Q9H6E4 229 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 SPAG4Q9NPE6 437 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 ADA2Q9NZK5 511 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 ZNRD1Q9P1U0 126 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 ONECUT1Q9UBC0 465 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 DUX4Q9UBX2 424 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 N6AMT1Q9Y5N5 214 aa11.55□□□□□ -0.56
DNMT1-213ENST00000587604 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-213ENST00000587604 NDUFB3O43676 98 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 TIPRLO75663 272 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 PSKH1P11801 424 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 NAA10P41227 235 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-213ENST00000587604 ELF3P78545 371 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-213ENST00000587604 RPL13AP3Q6NVV1 102 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 DPY19L4Q7Z388 723 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 WDR86Q86TI4 376 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 GALNT4Q8N4A0 578 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 OR1M1Q8NGA1 313 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 OR51L1Q8NGJ5 315 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 MCUR1Q96AQ8 359 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 SLAMF6Q96DU3 332 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 CMTM5Q96DZ9 223 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 SEMA6AQ9H2E6 1030 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 SIRT7Q9NRC8 400 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 CENPMQ9NSP4 180 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 CD300AQ9UGN4 299 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 PRPF19Q9UMS4 504 aaKnown RBP11.54□□□□□ -0.56
DNMT1-213ENST00000587604 COMMD3-BMI1R4GMX3 469 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 V9GYQ6 96 aa11.54□□□□□ -0.56
DNMT1-213ENST00000587604 RNASEK-C17orf49H0YIS7 233 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 ZNF593O00488 134 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-213ENST00000587604 NPFFO15130 113 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 SPARCP09486 303 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 CSF1P09603 554 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 RRM2P31350 389 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 FMO3P31513 532 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 SLC15A1P46059 708 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 TGM4P49221 684 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 ENTPD1P49961 510 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 FAM3AP98173 230 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 EGR3Q06889 387 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 TEX30Q5JUR7 227 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 ATPAF1Q5TC12 328 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-213ENST00000587604 PGBD2Q6P3X8 592 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 LYPD4Q6UWN0 246 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 C1orf122Q6ZSJ8 110 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 SLC16A9Q7RTY1 509 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 RNF148Q8N7C7 305 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 FAM216BQ8N7L0 139 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 Q8N7P7 452 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 OR52L1Q8NGH7 329 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 OR5R1Q8NH85 324 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 SGK3Q96BR1 496 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 DCTN5Q9BTE1 182 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 EGLN3Q9H6Z9 239 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 FBLN5Q9UBX5 448 aa11.53□□□□□ -0.56
DNMT1-213ENST00000587604 CDH10Q9Y6N8 788 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms