RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SELENOFO60613 162 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 ZNF12P17014 697 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 FASP25445 335 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 PMELP40967 661 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 OPRL1P41146 370 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 ZNF121P58317 390 aaPredicted RBP10.38□□□□□ -0.75
SS18-225ENST00000585121 ESRRGP62508 458 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 ZNF154Q13106 437 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 GFOD2Q3B7J2 385 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 ZNF404Q494X3 552 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 ARMCX4Q5H9R4 360 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 LCN1P1Q5VSP4 162 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 TMEM236Q5W0B7 351 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 USP43Q70EL4 1123 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 SLC16A9Q7RTY1 509 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 FTMTQ8N4E7 242 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 RGCCQ9H4X1 137 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 NIPAL2Q9H841 368 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 NTN4Q9HB63 628 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 BRD7Q9NPI1 651 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 MMP26Q9NRE1 261 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 LAMP5Q9UJQ1 280 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 C5orf63A6NC05 138 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 A6NLC8 198 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 G3V2T6 193 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 TRAPPC2LH3BP13 241 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 GRPP07492 148 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 FCGR1AP12314 374 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 GNALP38405 381 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
SS18-225ENST00000585121 PITPNBP48739 271 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 SEC61A1P61619 476 aaKnown RBP10.37□□□□□ -0.75
SS18-225ENST00000585121 FAM3AP98173 230 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 SLC34A1Q06495 639 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 APOFQ13790 326 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 RCN1Q15293 331 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 MPPED2Q15777 294 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 FAM201AQ5SY85 155 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 FAHD1Q6P587 224 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 LRRN1Q6UXK5 716 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 DCDC5Q6ZRR9 648 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 KRT77Q7Z794 578 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 ZDHHC13Q8IUH4 622 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 PARP8Q8N3A8 854 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 BOLLQ8N9W6 283 aaKnown RBP10.37□□□□□ -0.75
SS18-225ENST00000585121 DEFB108BQ8NET1 73 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 CSNK2A3Q8NEV1 391 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 ZFAND2BQ8WV99 257 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 SGK3Q96BR1 496 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 KRT84Q9NSB2 600 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 C1orf123Q9NWV4 160 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 H2AFY2Q9P0M6 372 aaPredicted RBP10.37□□□□□ -0.75
SS18-225ENST00000585121 CLN8Q9UBY8 286 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 OPN4Q9UHM6 478 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 ENOPH1Q9UHY7 261 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 AP4S1Q9Y587 144 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 INSIG2Q9Y5U4 225 aa10.37□□□□□ -0.75
SS18-225ENST00000585121 TRAV38-1A0A0B4J264 116 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 hCG_1807616A0A1W2PRN6 198 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 TRIM77I1YAP6 450 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 LGALS8O00214 317 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 NDUFA2O43678 99 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 RGS9O75916 674 aaPredicted RBP10.36□□□□□ -0.75
SS18-225ENST00000585121 VENTXO95231 258 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 PTBP3O95758 552 aaKnown RBP10.36□□□□□ -0.75
SS18-225ENST00000585121 GSK3AP49840 483 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 DAPP51397 102 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 PTGES3Q15185 160 aaKnown RBP10.36□□□□□ -0.75
SS18-225ENST00000585121 OR8B8Q15620 311 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 ATP6AP1Q15904 470 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 KCTD18Q6PI47 426 aaPredicted RBP10.36□□□□□ -0.75
SS18-225ENST00000585121 RBMS3Q6XE24 437 aaKnown RBP10.36□□□□□ -0.75
SS18-225ENST00000585121 BBS1Q8NFJ9 593 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 PYDC1Q8WXC3 89 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 DVL3Q92997 716 aaPredicted RBP10.36□□□□□ -0.75
SS18-225ENST00000585121 AMELYQ99218 206 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 MICU1Q9BPX6 476 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 YIPF3Q9GZM5 350 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 NKX1-2Q9UD57 310 aaPredicted RBP10.36□□□□□ -0.75
SS18-225ENST00000585121 ZNF391Q9UJN7 358 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 TMEM14AQ9Y6G1 99 aa10.36□□□□□ -0.75
SS18-225ENST00000585121 ANK2Q01484 3957 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 ANXA2P2A6NMY6 339 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 ANOS1P23352 680 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 NPY4RP50391 375 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 HILS1P60008 231 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 IL5RAQ01344 420 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 RAB40AQ8WXH6 277 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 TEAD3Q99594 435 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 PAPOLGQ9BWT3 736 aaKnown RBP10.35□□□□□ -0.75
SS18-225ENST00000585121 ABCB9Q9NP78 766 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 ERVK-18Q9QC07 812 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 NUP50Q9UKX7 468 aa10.35□□□□□ -0.75
SS18-225ENST00000585121 IGHV2-70DA0A0C4DH43 119 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 hCG_38984A0A1B0GV85 526 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 OOEPA6NGQ2 149 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 ACOD1A6NK06 481 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 C3orf80F5H4A9 247 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 H3BNX3 289 aa10.34□□□□□ -0.75
SS18-225ENST00000585121 PHYHO14832 338 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms