RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ADAM20O43506 726 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 FPR3P25089 353 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 RRM2P31350 389 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 GABRA5P31644 462 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 RSPO1Q2MKA7 263 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-220ENST00000585031 FOXB2Q5VYV0 432 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 TTC23Q5W5X9 447 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 TBPL2Q6SJ96 375 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 PNLDC1Q8NA58 520 aaKnown RBP14.83□□□□□ -0.04
TOP3A-220ENST00000585031 U3KQV3 271 aa14.83□□□□□ -0.04
TOP3A-220ENST00000585031 A0A1B0GW55 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 A0A1W2PRD5 423 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 A0A1W2PRF3 423 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 A0A1W2PRM7 423 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DLGAP1O14490 977 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DIRAS1O95057 198 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 TNFAIP8O95379 198 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 MPIG6BO95866 241 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 IGF2P01344 180 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 LYNP07948 512 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4L2P0CJ85 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4L3P0CJ86 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4L4P0CJ87 422 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4L5P0CJ88 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4L6P0CJ89 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4L7P0CJ90 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 NR2C1P13056 603 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 MYF6P23409 242 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 RBM34P42696 430 aaKnown RBP14.82□□□□□ -0.04
TOP3A-220ENST00000585031 OR1E2P47887 323 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 SCRN3Q0VDG4 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 POU4F2Q12837 409 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 PIN1Q13526 163 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-220ENST00000585031 SLC36A3Q495N2 470 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4L9Q6RFH8 374 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-220ENST00000585031 PNKDQ8N490 385 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 BOLLQ8N9W6 283 aaKnown RBP14.82□□□□□ -0.04
TOP3A-220ENST00000585031 OR1F12Q8NHA8 337 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 GIPC3Q8TF64 312 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 COG8Q96MW5 612 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 MMP28Q9H239 520 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 TMEM100Q9NV29 134 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 VNN3Q9NY84 501 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 DUX4Q9UBX2 424 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 FAM96BQ9Y3D0 163 aa14.82□□□□□ -0.04
TOP3A-220ENST00000585031 LGALS8O00214 317 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 IMPA2O14732 288 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 RER1O15258 196 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 IRF2P14316 349 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 IFNA8P32881 189 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 GUCA1AP43080 201 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-220ENST00000585031 BLMHQ13867 455 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 TMEM179BQ7Z7N9 219 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 KLHDC1Q8N7A1 406 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 RASD2Q96D21 266 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 DNAJB11Q9UBS4 358 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 LYVE1Q9Y5Y7 322 aa14.81□□□□□ -0.04
TOP3A-220ENST00000585031 RNASEK-C17orf49H0YIS7 233 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 DVL1O14640 695 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 GADD45GO95257 159 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 GYPAP02724 150 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 FBP1P09467 338 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 ANXA8P13928 327 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 CTLA4P16410 223 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 CD200P41217 278 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 RPS6KA3P51812 740 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 ADARB1P78563 741 aaKnown RBP14.8□□□□□ -0.04
TOP3A-220ENST00000585031 KLRD1Q13241 179 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 FNDC8Q8TC99 324 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 WACQ9BTA9 647 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 CNTD2Q9H8S5 307 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 SIRT7Q9NRC8 400 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 RNF7Q9UBF6 113 aa14.8□□□□□ -0.04
TOP3A-220ENST00000585031 RPUSD1Q9UJJ7 312 aaKnown RBP14.8□□□□□ -0.04
TOP3A-220ENST00000585031 TRAV27A0A087WT01 109 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 ARRDC5A6NEK1 342 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 ANKRD61A6NGH8 418 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 ADARB2-AS1A8MUL3 147 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 CCNB2O95067 398 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 PPP1R8Q12972 351 aaKnown RBP14.79□□□□□ -0.04
TOP3A-220ENST00000585031 NSUN5P1Q3KNT7 163 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 ZIK1Q3SY52 487 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-220ENST00000585031 CDONQ4KMG0 1287 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 TSEN54Q7Z6J9 526 aaKnown RBP14.79□□□□□ -0.04
TOP3A-220ENST00000585031 FAM90A1Q86YD7 464 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 HS3ST5Q8IZT8 346 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 Q8N7P7 452 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 CELF2-AS1Q8N7Q2 184 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 OR4C15Q8NGM1 316 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 OR11L1Q8NGX0 322 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 OR51A7Q8NH64 312 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 C17orf50Q8WW18 174 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 ZNF556Q9HAH1 456 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 KRT84Q9NSB2 600 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 ENOPH1Q9UHY7 261 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 ADAM18Q9Y3Q7 739 aa14.79□□□□□ -0.04
TOP3A-220ENST00000585031 H1F0P07305 194 aaKnown RBP14.78□□□□□ -0.04
TOP3A-220ENST00000585031 PRKACGP22612 351 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 ANOS1P23352 680 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 KIR2DS4P43632 304 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms