RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 TGFAP01135 160 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 IGLV3-1P01715 115 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 DVL1P1P54792 670 aaPredicted RBP13.68□□□□□ -0.22
ERBB2-222ENST00000584908 SNCBQ16143 134 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 ZNF829Q3KNS6 432 aaPredicted RBP13.68□□□□□ -0.22
ERBB2-222ENST00000584908 KRTAP21-3Q3LHN1 58 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 TMEM155Q4W5P6 130 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 ZNF684Q5T5D7 378 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 LRRC28Q86X40 367 aaPredicted RBP13.68□□□□□ -0.22
ERBB2-222ENST00000584908 RAB39BQ96DA2 213 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 LYZL4Q96KX0 146 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 C8orf4Q9NR00 106 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 FAM118AQ9NWS6 357 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 NUFIP1Q9UHK0 495 aaKnown RBP13.68□□□□□ -0.22
ERBB2-222ENST00000584908 MRM2Q9UI43 246 aaKnown RBP13.68□□□□□ -0.22
ERBB2-222ENST00000584908 KCNS2Q9ULS6 477 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 GMPPBQ9Y5P6 360 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 SVEP1Q4LDE5 3571 aa13.68□□□□□ -0.22
ERBB2-222ENST00000584908 LOC100130705A0A1B0GUX0 176 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 ANKRD30BLA7E2S9 258 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 J3QRE1 110 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 MPZL2O60487 215 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 ENTPD6O75354 484 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 ANPEPP15144 967 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 ACKR3P25106 362 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 PMELP40967 661 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 MTNR1AP48039 350 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 BTG1P62324 171 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 HNRNPA0Q13151 305 aaKnown RBP13.67□□□□□ -0.22
ERBB2-222ENST00000584908 SSX6Q7RTT6 188 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 MOGAT3Q86VF5 341 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 ENTHD1Q8IYW4 607 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 PACRGLQ8N7B6 248 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 RHOXF1Q8NHV9 184 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 ZNF420Q8TAQ5 688 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-222ENST00000584908 APOL4Q9BPW4 351 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 MOB1AQ9H8S9 216 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 SMPD3Q9NY59 655 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-222ENST00000584908 CDC42EP3Q9UKI2 254 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 IKZF2Q9UKS7 526 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 WNK2Q9Y3S1 2297 aa13.67□□□□□ -0.22
ERBB2-222ENST00000584908 A0A1W2PQL4 384 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-222ENST00000584908 SULT1C4O75897 302 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 PNPP00491 289 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 CST4P01036 141 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 MSMBP08118 114 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 ATP6V1B1P15313 513 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 CPT2P23786 658 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 RBMXP38159 391 aaKnown RBP13.66□□□□□ -0.22
ERBB2-222ENST00000584908 MZT1Q08AG7 82 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 RCN1Q15293 331 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 ZMYND11Q15326 602 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 GFOD2Q3B7J2 385 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 C1orf87Q8N0U7 546 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 FTMTQ8N4E7 242 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 GAL3ST1Q99999 423 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 TTTY10Q9BZA0 68 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 PBOV1Q9GZY1 135 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 G6PC2Q9NQR9 355 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 R4GMQ9 66 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 DOCK11Q5JSL3 2073 aa13.66□□□□□ -0.22
ERBB2-222ENST00000584908 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-222ENST00000584908 LRRC30A6NM36 301 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 SNTNA6NMZ2 147 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 ANKRD65E5RJM6 399 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 CASQ2O14958 399 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-222ENST00000584908 MDH2P40926 338 aaKnown RBP13.65□□□□□ -0.22
ERBB2-222ENST00000584908 ISL1P61371 349 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 MFGE8Q08431 387 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-222ENST00000584908 MPPED2Q15777 294 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 Q6ZSR3 168 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 ELMOD2Q8IZ81 293 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 MUC20Q8N307 709 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-222ENST00000584908 SPICQ8N5J4 248 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 ABCB9Q9NP78 766 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 C14orf119Q9NWQ9 140 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 LPAR3Q9UBY5 353 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 RHBDD3Q9Y3P4 386 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 MPC1Q9Y5U8 109 aa13.65□□□□□ -0.22
ERBB2-222ENST00000584908 IGHV3-64DA0A0J9YX35 117 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 ISPDA4D126 451 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 METTL15A6NJ78 407 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 F5H0A9 414 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-222ENST00000584908 MAGEB4O15481 346 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-222ENST00000584908 FAM20BO75063 409 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 APOL3O95236 402 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 CYB5R3P00387 301 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-222ENST00000584908 TTRP02766 147 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 KRT8P05787 483 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 ATP6V1E1P36543 226 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 CHRFAM7AQ494W8 412 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 ZBTB37Q5TC79 503 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 PRAMEF6Q5VXH4 476 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 GLCCI1Q86VQ1 547 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 KLHL36Q8N4N3 616 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 OR10H4Q8NGA5 316 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 OR51F2Q8NH61 342 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 DVL3Q92997 716 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-222ENST00000584908 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
ERBB2-222ENST00000584908 ITPKCQ96DU7 683 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms