RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 EPHA2P29317 976 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 SLX4IPQ5VYV7 408 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 PHC2Q8IXK0 858 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 TCEANCQ8N8B7 351 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 BOLLQ8N9W6 283 aaKnown RBP17.12■□□□□ 0.33
SS18-224ENST00000584083 OR8S1Q8NH09 359 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 CENPNQ96H22 339 aaPredicted RBP17.12■□□□□ 0.33
SS18-224ENST00000584083 NIPAL2Q9H841 368 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 C14orf119Q9NWQ9 140 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 RNF7Q9UBF6 113 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 MIOXQ9UGB7 285 aa17.12■□□□□ 0.33
SS18-224ENST00000584083 PPIAL4CA0A0B4J2A2 164 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 hCG_38984A0A1B0GV85 526 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 ZAR1LA6NP61 321 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 ADRA2CP18825 462 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 GSK3AP49840 483 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 KRTAP24-1Q3LI83 254 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 ZNF404Q494X3 552 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 KCTD18Q6PI47 426 aaPredicted RBP17.11■□□□□ 0.33
SS18-224ENST00000584083 PLPP7Q8NBV4 271 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 C19orf18Q8NEA5 215 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 DEFB108BQ8NET1 73 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 NANPQ8TBE9 248 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 NEIL1Q96FI4 390 aaPredicted RBP17.11■□□□□ 0.33
SS18-224ENST00000584083 CIB1Q99828 191 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 SSBP3Q9BWW4 388 aaPredicted RBP17.11■□□□□ 0.33
SS18-224ENST00000584083 RGCCQ9H4X1 137 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 MMP26Q9NRE1 261 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 OR5V1Q9UGF6 321 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 LRCH1Q9Y2L9 728 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 LRP12Q9Y561 859 aa17.11■□□□□ 0.33
SS18-224ENST00000584083 TRAPPC2LH3BP13 241 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 PSMD9O00233 223 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 FSTL3O95633 263 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 CPT2P23786 658 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 GNALP38405 381 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 PSMA6P60900 246 aaKnown RBP17.1■□□□□ 0.33
SS18-224ENST00000584083 GNB2P62879 340 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 C12orf73Q69YU5 71 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 MEPCEQ7L2J0 689 aaKnown RBP17.1■□□□□ 0.33
SS18-224ENST00000584083 NLRC3Q7RTR2 1065 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 C1QL2Q7Z5L3 287 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 BCDIN3DQ7Z5W3 292 aaKnown RBP17.1■□□□□ 0.33
SS18-224ENST00000584083 CSNK2A3Q8NEV1 391 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 PYDC1Q8WXC3 89 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 IL4I1Q96RQ9 567 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 CNN2Q99439 309 aaKnown RBP17.1■□□□□ 0.33
SS18-224ENST00000584083 C1orf123Q9NWV4 160 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 OAZ3Q9UMX2 235 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 TMEM14AQ9Y6G1 99 aa17.1■□□□□ 0.33
SS18-224ENST00000584083 hCG_1807616A0A1W2PRN6 198 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 SAC3D1A6NKF1 404 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 A8MXK9 166 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 PTBP3O95758 552 aaKnown RBP17.09■□□□□ 0.33
SS18-224ENST00000584083 EPHA1P21709 976 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 SNCBQ16143 134 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 OR8B3Q8NGG8 313 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 TMEM163Q8TC26 289 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 OR8B2Q96RD0 313 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 PAPOLGQ9BWT3 736 aaKnown RBP17.09■□□□□ 0.33
SS18-224ENST00000584083 MROQ9BYG7 248 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 TTTY10Q9BZA0 68 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 OPN4Q9UHM6 478 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 POLR3KQ9Y2Y1 108 aaPredicted RBP17.09■□□□□ 0.33
SS18-224ENST00000584083 RHBDD3Q9Y3P4 386 aa17.09■□□□□ 0.33
SS18-224ENST00000584083 SLC22A31A6NKX4 558 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 RGS9O75916 674 aaPredicted RBP17.08■□□□□ 0.32
SS18-224ENST00000584083 ZNF12P17014 697 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 CD80P33681 288 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 HOXA4Q00056 320 aaPredicted RBP17.08■□□□□ 0.32
SS18-224ENST00000584083 ZNF154Q13106 437 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 KPNB1Q14974 876 aaKnown RBP17.08■□□□□ 0.32
SS18-224ENST00000584083 OR8B8Q15620 311 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 NXNL2Q5VZ03 156 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 SFRP4Q6FHJ7 346 aaPredicted RBP17.08■□□□□ 0.32
SS18-224ENST00000584083 DEGS2Q6QHC5 323 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 DCDC5Q6ZRR9 648 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 ZNF826PQ6ZT77 177 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 FTMTQ8N4E7 242 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 OR8B12Q8NGG6 310 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 ASB17Q8WXJ9 295 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 MRI1Q9BV20 369 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 C19orf24Q9BVV8 132 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 RIBC2Q9H4K1 309 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 IKZF2Q9UKS7 526 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 INSIG2Q9Y5U4 225 aa17.08■□□□□ 0.32
SS18-224ENST00000584083 TMEM269A0A1B0GVZ9 245 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 C3orf80F5H4A9 247 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 LGALS8O00214 317 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 POLR2IP36954 125 aaKnown RBP17.07■□□□□ 0.32
SS18-224ENST00000584083 PITPNBP48739 271 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 ACTR3P61158 418 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 EFNB1P98172 346 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 KCNJ8Q15842 424 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 AADACL4Q5VUY2 407 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 LYPD2Q6UXB3 125 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 GID4Q8IVV7 300 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 ZNF418Q8TF45 676 aaPredicted RBP17.07■□□□□ 0.32
SS18-224ENST00000584083 PPP1R3EQ9H7J1 279 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 COPS3Q9UNS2 423 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms