RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 DCDC5Q6ZRR9 648 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.29□□□□□ -1.08
SKA2-208ENST00000583927 FTMTQ8N4E7 242 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 BBS1Q8NFJ9 593 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 OR56B2PQ8NGI1 322 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 OR11L1Q8NGX0 322 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 NANPQ8TBE9 248 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 ASB17Q8WXJ9 295 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 DACT3Q96B18 629 aaPredicted RBP8.29□□□□□ -1.08
SKA2-208ENST00000583927 SGK3Q96BR1 496 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 REEP6Q96HR9 211 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 MNTQ99583 582 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 TMEM246Q9BRR3 403 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 C14orf119Q9NWQ9 140 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 HAO2Q9NYQ3 351 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 TVP23BQ9NYZ1 205 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 ZNF319Q9P2F9 582 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 RNF7Q9UBF6 113 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 OPN4Q9UHM6 478 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 LAMP5Q9UJQ1 280 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 PPIAL4AQ9Y536 164 aa8.29□□□□□ -1.08
SKA2-208ENST00000583927 DSCAML1Q8TD84 2053 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 A0A0U1RQV5 110 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 CCDC182A6NF36 153 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 ANKRD30BLA7E2S9 258 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 TRAPPC2LH3BP13 241 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 PHYHO14832 338 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 PRKYO43930 277 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 FAM20BO75063 409 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 CIB2O75838 187 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 CYB5R3P00387 301 aaPredicted RBP8.28□□□□□ -1.08
SKA2-208ENST00000583927 LHBP01229 141 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 IGLV3-1P01715 115 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 ATP6V1B1P15313 513 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 ADRA2CP18825 462 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 GSK3AP49840 483 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 NPY4RP50391 375 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 PRSS12P56730 875 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 ACTR3P61158 418 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 LCN2P80188 198 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 MPPED2Q15777 294 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 FAM76BQ5HYJ3 339 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 AADACL4Q5VUY2 407 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 FAM57BQ71RH2 274 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 MEPCEQ7L2J0 689 aaKnown RBP8.28□□□□□ -1.08
SKA2-208ENST00000583927 GID4Q8IVV7 300 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 PHC2Q8IXK0 858 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 C10orf67Q8IYJ2 551 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 ZNF679Q8IYX0 411 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 DEFB108BQ8NET1 73 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 TMEM163Q8TC26 289 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 THEM6Q8WUY1 208 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 LRTOMTQ8WZ04 291 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 NEIL1Q96FI4 390 aaPredicted RBP8.28□□□□□ -1.08
SKA2-208ENST00000583927 PGAM5Q96HS1 289 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 SSBP3Q9BWW4 388 aaPredicted RBP8.28□□□□□ -1.08
SKA2-208ENST00000583927 GABARAPL3Q9BY60 117 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 TLNRD1Q9H1K6 362 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 C7orf69Q9H7B7 122 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 METTL17Q9H7H0 456 aaPredicted RBP8.28□□□□□ -1.08
SKA2-208ENST00000583927 RNPEPL1Q9HAU8 725 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 LRP12Q9Y561 859 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 INSIG2Q9Y5U4 225 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 MPC1Q9Y5U8 109 aa8.28□□□□□ -1.08
SKA2-208ENST00000583927 LOC105371242A0A075B767 164 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 TRAV38-1A0A0B4J264 116 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 LGALS8O00214 317 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 TNFRSF13BO14836 293 aaPredicted RBP8.27□□□□□ -1.09
SKA2-208ENST00000583927 TBX1O43435 398 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 CST4P01036 141 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 RPS2P15880 293 aaKnown RBP8.27□□□□□ -1.09
SKA2-208ENST00000583927 EPHA2P29317 976 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 NAA10P41227 235 aaPredicted RBP8.27□□□□□ -1.09
SKA2-208ENST00000583927 RPS7P62081 194 aaKnown RBP8.27□□□□□ -1.09
SKA2-208ENST00000583927 PAX8Q06710 450 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 ZNF154Q13106 437 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 KRTAP24-1Q3LI83 254 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 ZBTB37Q5TC79 503 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 PRAMEF6Q5VXH4 476 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 ZFP1Q6P2D0 407 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 LRRN1Q6UXK5 716 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 ZNF841Q6ZN19 808 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 CCDC121Q6ZUS5 278 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 SPATC1Q76KD6 591 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 ZNF771Q7L3S4 317 aaPredicted RBP8.27□□□□□ -1.09
SKA2-208ENST00000583927 NLRC3Q7RTR2 1065 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 AMIGO2Q86SJ2 522 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 GALNT4Q8N4A0 578 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 SEMA6DQ8NFY4 1073 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 OR8B3Q8NGG8 313 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 OR8B2Q96RD0 313 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 CNN2Q99439 309 aaKnown RBP8.27□□□□□ -1.09
SKA2-208ENST00000583927 CIB1Q99828 191 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 RBM4BQ9BQ04 359 aaKnown RBP8.27□□□□□ -1.09
SKA2-208ENST00000583927 MROQ9BYG7 248 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 DNAJC27Q9NZQ0 273 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 OAZ3Q9UMX2 235 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 KLHDC2Q9Y2U9 406 aa8.27□□□□□ -1.09
SKA2-208ENST00000583927 TMEM210A6NLX4 147 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms