RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SIGLEC14Q08ET2 396 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF816Q0VGE8 651 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 PNOCQ13519 176 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 KLHL40Q2TBA0 621 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 NEGR1Q7Z3B1 354 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 TRAM1L1Q8N609 369 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 RNF182Q8N6D2 247 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 PROKR2Q8NFJ6 384 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 OR9A2Q8NGT5 310 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 PIH1D2Q8WWB5 315 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 RERGQ96A58 199 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 ISOC2Q96AB3 205 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 KIAA1143Q96AT1 154 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF707Q96C28 371 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 PRSS16Q9NQE7 514 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 ADGRA3Q8IWK6 1321 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 YEATS2Q9ULM3 1422 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 IGHV3-72A0A0B4J1Y9 119 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 IGHV7-4-1A0A0J9YVY3 117 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 SERPINE3A8MV23 424 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 RPL36A-HNRNPH2H7BZ11 118 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 PAHP00439 452 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 IGHV3-11P01762 117 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 BCAP31P51572 246 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 TSC22D1Q15714 1073 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 YIF1BQ5BJH7 314 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 RTL4Q6ZR62 310 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 MRPL21Q7Z2W9 205 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 MDP1Q86V88 176 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 C19orf18Q8NEA5 215 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 RXFP4Q8TDU9 374 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 ASZ1Q8WWH4 475 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 NAT6Q93015 286 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 NAP1L5Q96NT1 182 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF2Q9BSG1 426 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 OR2AG1Q9H205 316 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF442Q9H7R0 627 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 BRWD3Q6RI45 1802 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 SCN1AP35498 2009 aa2.63□□□□□ -1.99
SMCHD1-205ENST00000581383 IGLV3-12A0A075B6K2 115 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 TRAV6A0A075B6T7 132 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 CENPVL3A0A0U1RRI6 287 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 CATP04040 527 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 TACSTD2P09758 323 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 GABRR2P28476 465 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 PEX19P40855 299 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 PSMD4P55036 377 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 DAOAP59103 153 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 YWHAEP62258 255 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 C5orf64Q2M2E5 130 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 OR2T5Q6IEZ7 315 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 H3F3CQ6NXT2 135 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 SLC25A34Q6PIV7 304 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 OPN5Q6U736 354 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 CD300LGQ6UXG3 332 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 RAB43Q86YS6 212 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 FAM184AQ8NB25 1140 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 OR4M1Q8NGD0 313 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 OR2T29Q8NH02 315 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 DEDD2Q8WXF8 326 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 RCN3Q96D15 328 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 C18orf15Q96N68 181 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 AGMATQ9BSE5 352 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 TOLLIPQ9H0E2 274 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 ING2Q9H160 280 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 RGCCQ9H4X1 137 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 DYRK4Q9NR20 520 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 FBXO8Q9NRD0 319 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 RHBDL2Q9NX52 303 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 C21orf62Q9NYP8 219 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 ADA2Q9NZK5 511 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 PEF1Q9UBV8 284 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 HES2Q9Y543 173 aa2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 BRCA1P38398 1863 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-205ENST00000581383 SLC22A20A6NK97 555 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 K7EM74 188 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 TAAR5O14804 337 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 CHMP2AO43633 222 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 MT-ND4P03905 459 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 PMCHP20382 165 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 OR1G1P47890 313 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 OR2B8PP59922 312 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 LCN2P80188 198 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF616Q08AN1 781 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 WDR43Q15061 677 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 PRSS8Q16651 343 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 SLC25A35Q3KQZ1 300 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 TEX30Q5JUR7 227 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 MLIPQ5VWP3 458 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 IGFL1Q6UW32 110 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 OR5T1Q8NG75 326 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 C17orf50Q8WW18 174 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 RMI2Q96E14 147 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 OR4K3Q96R72 315 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 CTRCQ99895 268 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 KCNS3Q9BQ31 491 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 SULT4A1Q9BR01 284 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 REEP1Q9H902 201 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 CYP3A43Q9HB55 503 aa2.61□□□□□ -1.99
SMCHD1-205ENST00000581383 RBFOX1Q9NWB1 397 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms