RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 C11orf40Q8WZ69 217 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 TOX2Q96NM4 488 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 SSC5DA1L4H1 1573 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 TMEM272A0A1B0GTI8 110 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 COX7A2P2O60397 106 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 CYC1P08574 325 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 ZNF17P17021 662 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 RPL13AP40429 203 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 CLEC12BQ2HXU8 276 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 EGLN1Q9GZT9 426 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
CSNK1D-217ENST00000581241 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 FXYD1O00168 92 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 GPR31O00270 319 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 GPR37O15354 613 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 WDR1O75083 606 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 ZNF718Q3SXZ3 478 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 NOXO1Q8NFA2 376 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 B9D1Q9UPM9 204 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 ASPDHA6ND91 283 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 KCNAB1Q14722 419 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 YRDCQ86U90 279 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 NTNG2Q96CW9 530 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 RAB18Q9NP72 206 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 KIAA1456Q9P272 454 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 DBX1A6NMT0 343 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 IL10RAQ13651 578 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 AKR7LQ8NHP1 331 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 THOC3Q96J01 351 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 DOK1Q99704 481 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 CPEB3Q8NE35 698 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 MRPS24Q96EL2 167 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 MRGPRX4Q96LA9 322 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 PLEKHB1Q9UF11 243 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 A0A1W2PNR3 127 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 PRR35P0CG20 571 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 USF1P22415 310 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 CD27P26842 260 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 MPPED2Q15777 294 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 GSG1Q2KHT4 349 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
CSNK1D-217ENST00000581241 TNFSF11O14788 317 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 LSRQ86X29 649 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 RDH5Q92781 318 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 PINX1Q96BK5 328 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 FGF9P31371 208 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 FUT6P51993 359 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 ERVFC1-1P60608 527 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 ARRDC1Q8N5I2 433 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 OR10G3Q8NGC4 313 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 OR10D4PQ8NGN7 298 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 TINAGL1Q9GZM7 467 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 ST3GAL6Q9Y274 331 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 PTBP3O95758 552 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 SNRPEP62304 92 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 FGF22Q9HCT0 170 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 SFT2D2O95562 160 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 ABCD3P28288 659 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 PMP22Q01453 160 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 FAM27D1Q5T7N8 215 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 S1PR3Q99500 378 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 RGS13O14921 159 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 TM4SF4P48230 202 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 RAG2P55895 527 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 PJVKQ0ZLH3 352 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 NKG7Q16617 165 aa13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 BARX1Q9HBU1 254 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-217ENST00000581241 FAM166BA8MTA8 275 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 BTG2P78543 158 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 GGNBP1Q5YKI7 109 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 LYRM2Q9NU23 88 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 LRP12Q9Y561 859 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 SPRY1O43609 319 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 SULT1A3P0DMM9 295 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 SULT1A4P0DMN0 295 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 PRRX2Q99811 253 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 C19orf43Q9BQ61 176 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 ADGRL4Q9HBW9 690 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 AVPR2P30518 371 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 RPS27P42677 84 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 HAAOP46952 286 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 HIST1H3AP68431 136 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 OR5I1Q13606 314 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 C6orf15Q6UXA7 325 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 ABI3BPQ7Z7G0 1075 aa13.11□□□□□ -0.31
CSNK1D-217ENST00000581241 MED29Q9NX70 200 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms