RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 DVL1P1P54792 670 aaPredicted RBP16.9■□□□□ 0.3
SS18-218ENST00000581021 CR1LQ2VPA4 569 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 ZBTB49Q6ZSB9 765 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 LRRC28Q86X40 367 aaPredicted RBP16.9■□□□□ 0.3
SS18-218ENST00000581021 CELF2-AS1Q8N7Q2 184 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 Q8TCH9 128 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 MROQ9BYG7 248 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 FGF23Q9GZV9 251 aaPredicted RBP16.9■□□□□ 0.3
SS18-218ENST00000581021 RGCCQ9H4X1 137 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 UFSP2Q9NUQ7 469 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 IMPAD1Q9NX62 359 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 UBAP1Q9NZ09 502 aa16.9■□□□□ 0.3
SS18-218ENST00000581021 TMEM269A0A1B0GVZ9 245 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 A0A1W2PQL4 384 aaPredicted RBP16.89■□□□□ 0.29
SS18-218ENST00000581021 KIAA1324LA8MWY0 1029 aaPredicted RBP16.89■□□□□ 0.29
SS18-218ENST00000581021 GMDSO60547 372 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 IGLV3-1P01715 115 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 DCTDP32321 178 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 SEC61A1P61619 476 aaKnown RBP16.89■□□□□ 0.29
SS18-218ENST00000581021 SNRPGP62308 76 aaKnown RBP16.89■□□□□ 0.29
SS18-218ENST00000581021 ZNF181Q2M3W8 571 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 KRTAP21-3Q3LHN1 58 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 CHRFAM7AQ494W8 412 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 ZNF684Q5T5D7 378 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 TMEM186Q96B77 213 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 PBOV1Q9GZY1 135 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 SLC22A4Q9H015 551 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 HIF1ANQ9NWT6 349 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 CDC42EP3Q9UKI2 254 aa16.89■□□□□ 0.29
SS18-218ENST00000581021 ZNF670-ZNF695F2Z2N8 137 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 PLPP2O43688 288 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 ZNF254O75437 659 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 CFL1P23528 166 aaKnown RBP16.88■□□□□ 0.29
SS18-218ENST00000581021 DDOSTP39656 456 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 RIDAP52758 137 aaKnown RBP16.88■□□□□ 0.29
SS18-218ENST00000581021 SLC25A30Q5SVS4 291 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 ZNF826PQ6ZT77 177 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 PEG10Q86TG7 708 aaKnown RBP16.88■□□□□ 0.29
SS18-218ENST00000581021 C19orf18Q8NEA5 215 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 TRUB1Q8WWH5 349 aaKnown RBP16.88■□□□□ 0.29
SS18-218ENST00000581021 STMN2Q93045 179 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 RAB39BQ96DA2 213 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 MNTQ99583 582 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 G6PC2Q9NQR9 355 aa16.88■□□□□ 0.29
SS18-218ENST00000581021 NUFIP1Q9UHK0 495 aaKnown RBP16.88■□□□□ 0.29
SS18-218ENST00000581021 ATRQ13535 2644 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 A0A0U1RQV5 110 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 ANKRD30BLA7E2S9 258 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 F5H0A9 414 aaPredicted RBP16.87■□□□□ 0.29
SS18-218ENST00000581021 J3QRE1 110 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 TTRP02766 147 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 ZFP36P26651 326 aaKnown RBP16.87■□□□□ 0.29
SS18-218ENST00000581021 MDH2P40926 338 aaKnown RBP16.87■□□□□ 0.29
SS18-218ENST00000581021 EGR3Q06889 387 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 RCN1Q15293 331 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 ZSCAN26Q16670 478 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 TMEM155Q4W5P6 130 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 GLCCI1Q86VQ1 547 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 C11orf53Q8IXP5 236 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 ENTHD1Q8IYW4 607 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 OR10H4Q8NGA5 316 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 OR51F2Q8NH61 342 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 RNF166Q96A37 237 aaPredicted RBP16.87■□□□□ 0.29
SS18-218ENST00000581021 PAPOLGQ9BWT3 736 aaKnown RBP16.87■□□□□ 0.29
SS18-218ENST00000581021 SHARPINQ9H0F6 387 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 TMEM165Q9HC07 324 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 GMPPBQ9Y5P6 360 aa16.87■□□□□ 0.29
SS18-218ENST00000581021 ARHGAP32A7KAX9 2087 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 ACOD1A6NK06 481 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 CEACAM18A8MTB9 384 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 IFNL4K9M1U5 179 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 PHYHO14832 338 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 ANPEPP15144 967 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 PEX2P28328 305 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 CSNK2BP67870 215 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 ZNF85Q03923 595 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 POU4F2Q12837 409 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 TMED1Q13445 227 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 OCLNQ16625 522 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 ZNF829Q3KNS6 432 aaPredicted RBP16.86■□□□□ 0.29
SS18-218ENST00000581021 LPCAT4Q643R3 524 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 KLBQ86Z14 1044 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 OR51E1Q8TCB6 317 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 HPSE2Q8WWQ2 592 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 RFKQ969G6 155 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 ITPKCQ96DU7 683 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 RNFT2Q96EX2 444 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 BEX2Q9BXY8 128 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 PATZ1Q9HBE1 687 aaKnown RBP16.86■□□□□ 0.29
SS18-218ENST00000581021 GPR84Q9NQS5 396 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 FAM118AQ9NWS6 357 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 NOP16Q9Y3C1 178 aaKnown RBP16.86■□□□□ 0.29
SS18-218ENST00000581021 R4GMQ9 66 aa16.86■□□□□ 0.29
SS18-218ENST00000581021 GRPP07492 148 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 OR2T7P0C7T2 308 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 FAM157CP0CG43 387 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 MTNR1AP48039 350 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 LCN2P80188 198 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 LRRC36Q1X8D7 754 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 C1orf229Q6ZS94 237 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms