RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 FAM71F1Q96KD3 344 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 INTS14Q96SY0 518 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 ABHD6Q9BV23 337 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 POMT1Q9Y6A1 747 aa12.05□□□□□ -0.48
SMARCE1-216ENST00000580419 hCG_38984A0A1B0GV85 526 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 ACOD1A6NK06 481 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 HMGN1P05114 100 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 T-ENOLP0DO92 83 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 PSKH1P11801 424 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 MMP9P14780 707 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 RPS27P42677 84 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 PDCD1Q15116 288 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 FAM76BQ5HYJ3 339 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 FAM201AQ5SY85 155 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 ATPAF1Q5TC12 328 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 C16orf87Q6PH81 154 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 DEGS2Q6QHC5 323 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 METAP1DQ6UB28 335 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF771Q7L3S4 317 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 SLC16A9Q7RTY1 509 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 BCL6BQ8N143 479 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 GALNT4Q8N4A0 578 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 GCSAMQ8N6F7 178 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 CCDC197Q8NCU1 140 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 OR51L1Q8NGJ5 315 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 FEVQ99581 238 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 CENPMQ9NSP4 180 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 VNN3Q9NY84 501 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 TAS2R1Q9NYW7 299 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 MPC1Q9Y5U8 109 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 MEGF8Q7Z7M0 2845 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 WNK1Q9H4A3 2382 aa12.04□□□□□ -0.48
SMARCE1-216ENST00000580419 TRAV40A0A0B4J280 105 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 SRRM5B3KS81 715 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 C22orf46C9J442 243 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 ZNF205O95201 554 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 HSD11B1P28845 292 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 GSTT1P30711 240 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 NAA10P41227 235 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 PRKXP51817 358 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 IL5RAQ01344 420 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 HNRNPA0Q13151 305 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 SLC35D3Q5M8T2 416 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 LYPD4Q6UWN0 246 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 DPY19L4Q7Z388 723 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 OR6K6Q8NGW6 343 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 OR10Z1Q8NGY1 313 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 OTOSQ8NHW6 89 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 SGK3Q96BR1 496 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 LRGUKQ96M69 825 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 CHID1Q9BWS9 393 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 OR10A2Q9H208 303 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 YY1AP1Q9H869 796 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 UFSP2Q9NUQ7 469 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 ARMC1Q9NVT9 282 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 CTSZQ9UBR2 303 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 U3KQV3 271 aa12.03□□□□□ -0.48
SMARCE1-216ENST00000580419 TMEM210A6NLX4 147 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 TMPRSS2O15393 492 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 SOX14O95416 240 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 CST4P01036 141 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 CST1P01037 141 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 GYPBP06028 91 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 ANXA8P13928 327 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 DCTDP32321 178 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 CX3CR1P49238 355 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 FGF12P61328 243 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 CDK5Q00535 292 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 DBPQ10586 325 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 EIF2B1Q14232 305 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 TIGD6Q17RP2 521 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 MICBQ29980 383 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 Q6YL49 198 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 C1orf122Q6ZSJ8 110 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 FAM90A1Q86YD7 464 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 C11orf53Q8IXP5 236 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 ADGRG5Q8IZF4 528 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 PAPD5Q8NDF8 572 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 OR8S1Q8NH09 359 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 NPRL2Q8WTW4 380 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 NRBF2Q96F24 287 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 REEP6Q96HR9 211 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 WDFY2Q96P53 400 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 NIPSNAP1Q9BPW8 284 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 C1orf123Q9NWV4 160 aa12.02□□□□□ -0.49
SMARCE1-216ENST00000580419 C5orf63A6NC05 138 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 ADAM20O43506 726 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 NDUFA7O95182 113 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 LYNP07948 512 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 CLUP10909 449 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 OSMP13725 252 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 ATP6V1B1P15313 513 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 ANOS1P23352 680 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 RBMXP38159 391 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 GSK3AP49840 483 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 GYS2P54840 703 aa12.01□□□□□ -0.49
SMARCE1-216ENST00000580419 PRSS12P56730 875 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms