RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 RGS6P49758 472 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 HOXA4Q00056 320 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 C1orf146Q5VVC0 180 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 Q8N2B8 174 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 RCC1LQ96I51 464 aaKnown RBP11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 RSRC1Q96IZ7 334 aaKnown RBP11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 RBP7Q96R05 134 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 TXNIPQ9H3M7 391 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 POLE4Q9NR33 117 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 TMEM100Q9NV29 134 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 RNF7Q9UBF6 113 aa11.29□□□□□ -0.6
CSNK1D-211ENST00000579316 TRAV38-1A0A0B4J264 116 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 LCE6AA0A183 80 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 OR6C6A6NF89 314 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 DVL1O14640 695 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 PTBP3O95758 552 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 HLA-DPB1P04440 258 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 SCG5P05408 212 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 FPR3P25089 353 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 GUCA1AP43080 201 aaPredicted RBP11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 SLC35A2P78381 396 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 GK3PQ14409 553 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 AANATQ16613 207 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 OAFQ86UD1 273 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 LINC00471Q8N535 108 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 OR5L1Q8NGL2 311 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 TNFRSF14Q92956 283 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 REEP1Q9H902 201 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 SIRT7Q9NRC8 400 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 PTTG3PQ9NZH4 202 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 KAAG1Q9UBP8 84 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 ATPIF1Q9UII2 106 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 PCDHGB5Q9Y5G0 923 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 PCLOQ9Y6V0 5065 aa11.28□□□□□ -0.6
CSNK1D-211ENST00000579316 TRBV4-1A0A0J9YWV2 114 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 TCRBV3S1A0A5B6 114 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 MEIOCA2RUB1 952 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 OOEPA6NGQ2 149 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 GNGT2O14610 69 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 FAHP16930 419 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 GPR4P46093 362 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 MPPED2Q15777 294 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 SFRP4Q6FHJ7 346 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 OR2T5Q6IEZ7 315 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 TBPL2Q6SJ96 375 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 TMPRSS11FQ6ZWK6 438 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 ASRGL1Q7L266 308 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 CMTM4Q8IZR5 234 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 Q8N7P7 452 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 BHLHE23Q8NDY6 225 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 OR2T29Q8NH02 315 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 SLC7A6Q92536 515 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 FAM46AQ96IP4 442 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 SSX3Q99909 188 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 CHID1Q9BWS9 393 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 ZNF702PQ9H963 129 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 ONECUT1Q9UBC0 465 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 HIF3AQ9Y2N7 669 aa11.27□□□□□ -0.61
CSNK1D-211ENST00000579316 A0A1W2PPL8 197 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 CHST1O43916 411 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 CST1P01037 141 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 ZNF26P17031 533 aaPredicted RBP11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 RPL4P36578 427 aaKnown RBP11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 UBE2E1P51965 193 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 LY6EQ16553 131 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 ALG10Q5BKT4 473 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 FAM90A1Q86YD7 464 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 PNKDQ8N490 385 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 ST8SIA4Q92187 359 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 APOBEC3DQ96AK3 386 aaPredicted RBP11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 RAB3IPQ96QF0 476 aaPredicted RBP11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 FUZQ9BT04 418 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 WNT10AQ9GZT5 417 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 EMC7Q9NPA0 242 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 UFSP2Q9NUQ7 469 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 SAMHD1Q9Y3Z3 626 aaKnown RBP11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 LYVE1Q9Y5Y7 322 aa11.26□□□□□ -0.61
CSNK1D-211ENST00000579316 TRAV27A0A087WT01 109 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 FKBP6O75344 327 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 CCNB2O95067 398 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 GYPAP02724 150 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 OMPP47874 163 aa11.25□□□□□ -0.61
CSNK1D-211ENST00000579316 HMGA2P52926 109 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms