RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 SGK3Q96BR1 496 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 CPNE2Q96FN4 548 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 DACH2Q96NX9 599 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 TECTBQ96PL2 329 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 SPOCK3Q9BQ16 436 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 PLEKHB1Q9UF11 243 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 DOPEY2Q9Y3R5 2298 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 A0A1B0GTI1 187 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 ANXA2P2A6NMY6 339 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 VSTM5A8MXK1 200 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 M0R1B8 84 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 THBDP07204 575 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 CECR9P0C854 216 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 CCL2P13500 99 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF182P17025 639 aaPredicted RBP12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 FSTP19883 344 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 PTAFRP25105 342 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 THBS4P35443 961 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF83P51522 516 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 UCP2P55851 309 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 RPS23P62266 143 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 MXD1Q05195 221 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 GLYATL3Q5SZD4 288 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 Q6ZSR3 168 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 C22orf34Q6ZV56 151 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 NKAIN3Q8N8D7 197 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 ACBD4Q8NC06 268 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 OR51A4Q8NGJ6 313 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 FAM222BQ8WU58 562 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 SPSB4Q96A44 273 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 FGGYQ96C11 551 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 FOXRED1Q96CU9 486 aaPredicted RBP12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 TRMT61AQ96FX7 289 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 MRI1Q9BV20 369 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 C1QTNF6Q9BXI9 259 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 TPK1Q9H3S4 243 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 RNF167Q9H6Y7 350 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 A3GALT2U3KPV4 340 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 V9GYS6 101 aa12.03□□□□□ -0.48
CSNK1D-209ENST00000578904 ICE1Q9Y2F5 2266 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 ADGRG4Q8IZF6 3080 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 IGHV1-18A0A0C4DH31 117 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 A0A1W2PPK0 400 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 GGT3PA6NGU5 568 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 EPXP11678 715 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 RAB3AP20336 220 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 RPS19P39019 145 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 PPP1CBP62140 327 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 NAAAQ02083 359 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 INSL4Q14641 139 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 GLT8D1Q68CQ7 371 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 SP5Q6BEB4 398 aaPredicted RBP12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 MZT2AQ6P582 158 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 SEZ6L2Q6UXD5 910 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 OR14K1Q8NGZ2 314 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 OR10AC1Q8NH08 325 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 ACOT12Q8WYK0 555 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 REPIN1Q9BWE0 567 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 MMP27Q9H306 513 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 ZCCHC4Q9H5U6 513 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 ZNF319Q9P2F9 582 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 PIGLQ9Y2B2 252 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 V9GY05 133 aa12.02□□□□□ -0.49
CSNK1D-209ENST00000578904 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 NOTOA8MTQ0 251 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 H3BSH0 61 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 SMPD2O60906 423 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 ALX3O95076 343 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 CELA3BP08861 270 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 ZNF35P13682 527 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 COL8A1P27658 744 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 S100A5P33763 92 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 GSK3AP49840 483 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 CAPZA1P52907 286 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 SELENOVP59797 346 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 ZNF92Q03936 586 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 HGFACQ04756 655 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 HNRNPA0Q13151 305 aaKnown RBP12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 DYNC1I2Q13409 638 aaKnown RBP12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 ZNF718Q3SXZ3 478 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 ZNF404Q494X3 552 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 FAM27D1Q5T7N8 215 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 LINC00299Q6ZSB3 139 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 UTS2BQ765I0 119 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 CDH26Q8IXH8 852 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 OR2AE1Q8NHA4 323 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 MCFD2Q8NI22 146 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 ESRP2Q9H6T0 727 aaKnown RBP12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 ABCB9Q9NP78 766 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 TMEM138Q9NPI0 162 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 PTTG3PQ9NZH4 202 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 NPAP1Q9NZP6 1156 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 KCNN3Q9UGI6 736 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 STARD10Q9Y365 291 aa12.01□□□□□ -0.49
CSNK1D-209ENST00000578904 PTPN13Q12923 2485 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms