RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 MVKQ03426 396 aa18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 KRTAP1-1Q07627 177 aa18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 BCL2L15Q5TBC7 163 aa18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 C8orf59Q8N0T1 100 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 SETD9Q8NE22 299 aa18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 OR13G1Q8NGZ3 307 aa18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 MYOZ1Q9NP98 299 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 NUFIP1Q9UHK0 495 aaKnown RBP18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 OR52A1Q9UKL2 312 aa18.36■□□□□ 0.53
CDC42EP4-203ENST00000578516 FAM20BO75063 409 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 IGHA1P01876 353 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 SLC25A16P16260 332 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 ACHEP22303 614 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 GIFP27352 417 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 ACTC1P68032 377 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 ACTA1P68133 377 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 MAB21L1Q13394 359 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 RIPK1Q13546 671 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 OR8G1Q15617 311 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 OR8B8Q15620 311 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 CDONQ4KMG0 1287 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 WDR38Q5JTN6 314 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 PRSS35Q8N3Z0 413 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 ACBD7Q8N6N7 88 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 CCL17Q92583 94 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 C4orf36Q96KX1 117 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 ALG8Q9BVK2 526 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 FGF23Q9GZV9 251 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 SP140LQ9H930 580 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 ISG20L2Q9H9L3 353 aaKnown RBP18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 CHODLQ9H9P2 273 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 RHBDD3Q9Y3P4 386 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 ABCA1O95477 2261 aa18.35■□□□□ 0.53
CDC42EP4-203ENST00000578516 A0A1B0GWJ7 208 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 SNTNA6NMZ2 147 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 J3QLW9 94 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 PPIHO43447 177 aaKnown RBP18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 LMX1BO60663 402 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 IGLV3-1P01715 115 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 ZNF19P17023 458 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 DCTDP32321 178 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 PMELP40967 661 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 CRYBB2P43320 205 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 GPR6P46095 362 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 MMP16P51512 607 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 IL18R1Q13478 541 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 WDR86Q86TI4 376 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 MOGAT3Q86VF5 341 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 CATSPERDQ86XM0 798 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 FBLIM1Q8WUP2 373 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 EGLN1Q9GZT9 426 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 OPA3Q9H6K4 179 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 UFSP2Q9NUQ7 469 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 ERVK13-1Q9NX77 482 aa18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 RPL36Q9Y3U8 105 aaKnown RBP18.34■□□□□ 0.53
CDC42EP4-203ENST00000578516 CSPG4Q6UVK1 2322 aa18.33■□□□□ 0.53
CDC42EP4-203ENST00000578516 MALRD1Q5VYJ5 2156 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 A6NIN4 97 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 LY6G6DO95868 133 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 TNFSF4P23510 183 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 NANOS3P60323 173 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 RAB40BQ12829 278 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 MPPED2Q15777 294 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 FAM220AQ7Z4H9 259 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 ELMOD2Q8IZ81 293 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 PELI1Q96FA3 418 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 DIRC2Q96SL1 478 aa18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 PAPOLGQ9BWT3 736 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 MRPS18AQ9NVS2 196 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-203ENST00000578516 A0A0U1RQV5 110 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 LOC100289279A0A1B0GTE1 492 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 A0A1B0GTI1 187 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 E9PI62 339 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 C3orf80F5H4A9 247 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 NDUFS8O00217 210 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 SULT1C4O75897 302 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 ZNF205O95201 554 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 CYB5R3P00387 301 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 LIMS3P0CW19 117 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 LIMS4P0CW20 117 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 FAHP16930 419 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 USF1P22415 310 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 ETV1P50549 477 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 FAM201AQ5SY85 155 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 SGCDQ92629 289 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 GGHQ92820 318 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 RGCCQ9H4X1 137 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 GCM1Q9NP62 436 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 FGF20Q9NP95 211 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 MRPL15Q9P015 296 aaKnown RBP18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 IL19Q9UHD0 177 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 PCDHGB5Q9Y5G0 923 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 SNX5Q9Y5X3 404 aa18.32■□□□□ 0.52
CDC42EP4-203ENST00000578516 ANKRD30BLA7E2S9 258 aa18.31■□□□□ 0.52
CDC42EP4-203ENST00000578516 ZNF850A8MQ14 1090 aa18.31■□□□□ 0.52
CDC42EP4-203ENST00000578516 FADS2O95864 444 aaKnown RBP18.31■□□□□ 0.52
CDC42EP4-203ENST00000578516 MRPS11P82912 194 aaKnown RBP18.31■□□□□ 0.52
CDC42EP4-203ENST00000578516 DOC2BQ14184 412 aa18.31■□□□□ 0.52
CDC42EP4-203ENST00000578516 GALEQ14376 348 aa18.31■□□□□ 0.52
CDC42EP4-203ENST00000578516 HFEQ30201 348 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms