RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NFYCQ13952 458 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 SNAI3Q3KNW1 292 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 PLA1AQ53H76 456 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 PGM2L1Q6PCE3 622 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 TBPL2Q6SJ96 375 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 RNF144BQ7Z419 303 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR8S1Q8NH09 359 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 LZICQ8WZA0 190 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 TPD52L3Q96J77 140 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 PRRC1Q96M27 445 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 FNDC11Q9BVV2 318 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 CDCA4Q9BXL8 241 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 NDEL1Q9GZM8 345 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 WNT10AQ9GZT5 417 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 RNPEPL1Q9HAU8 725 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 DCTN6O00399 190 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 DUS4LO95620 317 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 TFF1P04155 84 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 NHLRC4P0CG21 123 aaPredicted RBP13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 NDUFB7P17568 137 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 CDKN2AP42771 156 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 CSNK2BP67870 215 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 EGFEM1PQ0D2K5 195 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 KLHL22Q53GT1 634 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 GPR139Q6DWJ6 353 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 ZNF730Q6ZMV8 503 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 DPY19L4Q7Z388 723 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 TMEM219Q86XT9 240 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 DPP10Q8N608 796 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 FAM156AQ8NDB6 213 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR5D13Q8NGL4 314 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR2AJ1Q8NGZ0 328 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 CCDC28BQ9BUN5 200 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 PRSS22Q9GZN4 317 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 SRA1Q9HD15 236 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 SLC25A10Q9UBX3 287 aaPredicted RBP13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 N6AMT1Q9Y5N5 214 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 IER3IP1Q9Y5U9 82 aa13.16□□□□□ -0.3
CTDNEP1-211ENST00000575783 M0R135 149 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 IFNA14P01570 189 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 ANOS1P23352 680 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 CRABP1P29762 137 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 NAA10P41227 235 aaPredicted RBP13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 CD83Q01151 205 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 TRAM2Q15035 370 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 CYBRD1Q53TN4 286 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 RABL3Q5HYI8 236 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 GLYATL3Q5SZD4 288 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 WDR82Q6UXN9 313 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 Q6ZS46 218 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 CCDC121Q6ZUS5 278 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 WDR86Q86TI4 376 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR56B2PQ8NGI1 322 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 DPF1Q92782 380 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 C12orf43Q96C57 262 aaKnown RBP13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 CHID1Q9BWS9 393 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 HAO2Q9NYQ3 351 aa13.15□□□□□ -0.3
CTDNEP1-211ENST00000575783 A0A087WUU8 490 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 NKX6-3A6NJ46 265 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 J3KTA2 159 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 LGALS4P56470 323 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 DOC2BQ14184 412 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 DGUOKQ16854 277 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 RFX4Q33E94 735 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 LRRC23Q53EV4 343 aaPredicted RBP13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 ATPAF1Q5TC12 328 aaPredicted RBP13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 STUMQ69YW2 141 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 DNM1P34Q6PK57 102 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 TMPRSS11FQ6ZWK6 438 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 MBOAT2Q6ZWT7 520 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 RNF113BQ8IZP6 322 aaKnown RBP13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 OR1M1Q8NGA1 313 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 SPTSSAQ969W0 71 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 MED30Q96HR3 178 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 NSRP1Q9H0G5 558 aaKnown RBP13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 MUC13Q9H3R2 512 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 RABEP2Q9H5N1 569 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 PNRC2Q9NPJ4 139 aaKnown RBP13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 SNX13Q9Y5W8 968 aa13.14□□□□□ -0.31
CTDNEP1-211ENST00000575783 IGLV1-36A0A0B4J1U3 117 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 ANKRD30BLA7E2S9 258 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 CDIPTO14735 213 aa13.13□□□□□ -0.31
CTDNEP1-211ENST00000575783 NDUFB2O95178 105 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms