RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CCDC90BQ9GZT6 254 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 SLC22A4Q9H015 551 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 TRIM36Q9NQ86 728 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 BABAM2Q9NXR7 383 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 MRPL15Q9P015 296 aaKnown RBP11.92□□□□□ -0.5
RPAIN-217ENST00000575711 FRRS1LQ9P0K9 344 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 NOP16Q9Y3C1 178 aaKnown RBP11.92□□□□□ -0.5
RPAIN-217ENST00000575711 LRRC42Q9Y546 428 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 CENPEQ02224 2701 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 APCP25054 2843 aa11.92□□□□□ -0.5
RPAIN-217ENST00000575711 LOC390937A0A1W2PQ73 354 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 E9PI62 339 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 TPD52L2O43399 206 aaKnown RBP11.91□□□□□ -0.5
RPAIN-217ENST00000575711 SYT7O43581 403 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 LILRA1O75019 489 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 NDUFS7O75251 213 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 DHRS3O75911 302 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 IGHV1-46P01743 117 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 MAP2K3P46734 347 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 EFNA4P52798 201 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 WNT4P56705 351 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 NANOS3P60323 173 aaKnown RBP11.91□□□□□ -0.5
RPAIN-217ENST00000575711 TSTQ16762 297 aaKnown RBP11.91□□□□□ -0.5
RPAIN-217ENST00000575711 CCDC58Q4VC31 144 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 FAM209AQ5JX71 171 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 TMEM244Q5VVB8 128 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 RPL22L1Q6P5R6 122 aaKnown RBP11.91□□□□□ -0.5
RPAIN-217ENST00000575711 Q6ZR03 302 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 NANOGP1Q8N7R0 232 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 CCDC54Q8NEL0 328 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 OR2Z1Q8NG97 314 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 ELMOD3Q96FG2 381 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 FOXC2Q99958 501 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 SOX7Q9BT81 388 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 COMMD4Q9H0A8 199 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 DECR2Q9NUI1 292 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 NKIRAS2Q9NYR9 191 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 ABCA12Q86UK0 2595 aa11.91□□□□□ -0.5
RPAIN-217ENST00000575711 LRBAP50851 2863 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 TRBV2A0A0J9YWF9 115 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 TMEM212A6NML5 194 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 OR4C45A6NMZ5 311 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 CYSRT1A8MQ03 144 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 MRPS14O60783 128 aaKnown RBP11.9□□□□□ -0.5
RPAIN-217ENST00000575711 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-217ENST00000575711 IGHV4-39P01824 125 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 MT-ND2P03891 347 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 ISG15P05161 165 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 ADH4P08319 380 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 RPSAP08865 295 aaKnown RBP11.9□□□□□ -0.5
RPAIN-217ENST00000575711 CCL1P22362 96 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 CA6P23280 308 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 ACKR3P25106 362 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 GNALP38405 381 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 MAGEB1P43366 347 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 GTF2A1P52655 376 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-217ENST00000575711 TAS2R43P59537 309 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 RIPPLY1Q0D2K3 151 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 TNK1Q13470 666 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 IRF3Q14653 427 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 OR8G1Q15617 311 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 ZNF676Q8N7Q3 588 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 PLPP7Q8NBV4 271 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 ZNF485Q8NCK3 441 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 OR5AK2Q8NH90 309 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 ADAT1Q9BUB4 502 aaKnown RBP11.9□□□□□ -0.5
RPAIN-217ENST00000575711 PAPOLGQ9BWT3 736 aaKnown RBP11.9□□□□□ -0.5
RPAIN-217ENST00000575711 EGLN1Q9GZT9 426 aa11.9□□□□□ -0.5
RPAIN-217ENST00000575711 CSMD2Q7Z408 3487 aa11.9□□□□□ -0.51
RPAIN-217ENST00000575711 ZNF816-ZNF321PA0A0X1KG74 233 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 A0A1B0GTI1 187 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 LOC107986453A0A1B0GWG9 222 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 DHRS7CA6NNS2 312 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 MLNRO43193 412 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 HLA-DPB1P04440 258 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 CD55P08174 381 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 ZNF12P17014 697 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 ACHEP22303 614 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 ART1P52961 327 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 CCL8P80075 99 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-217ENST00000575711 CDK5R1Q15078 307 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 ZBTB37Q5TC79 503 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 RDH10Q8IZV5 341 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 OR10AD1Q8NGE0 317 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 OR14K1Q8NGZ2 314 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 SAP30LQ9HAJ7 183 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 PLEKHA1Q9HB21 404 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 ABCB9Q9NP78 766 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 ENPP5Q9UJA9 477 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 ITGB1BP2Q9UKP3 347 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 PIGLQ9Y2B2 252 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 LRCH1Q9Y2L9 728 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 RHBDD3Q9Y3P4 386 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 V9GYS6 101 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 AKAP6Q13023 2319 aa11.89□□□□□ -0.51
RPAIN-217ENST00000575711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms