RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CD55P08174 381 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 ADH4P08319 380 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 SELEP16581 610 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 DCKP27707 260 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 OTX1P32242 354 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-216ENST00000575599 TMEM33P57088 247 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 ACTC1P68032 377 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 ACTA1P68133 377 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 MVKQ03426 396 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 HNRNPA0Q13151 305 aaKnown RBP11.24□□□□□ -0.61
RPAIN-216ENST00000575599 GLYATL3Q5SZD4 288 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 PGAP1Q75T13 922 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 OR8G5Q8NG78 346 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 OR10H4Q8NGA5 316 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 OR52I1Q8NGK6 324 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 OTOSQ8NHW6 89 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 THEM6Q8WUY1 208 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 RNF133Q8WVZ7 376 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
RPAIN-216ENST00000575599 SOX7Q9BT81 388 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 DUSP21Q9H596 190 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 ERVK-18Q9QC07 812 aa11.24□□□□□ -0.61
RPAIN-216ENST00000575599 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
RPAIN-216ENST00000575599 LOC100289279A0A1B0GTE1 492 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 DAPL1A0PJW8 107 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 IQCF6A8MYZ5 107 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 ZNF670-ZNF695F2Z2N8 137 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 WNT9BO14905 357 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 H2BFMP0C1H6 154 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 SBK2P0C263 348 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 ATP6V1B1P15313 513 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 CDH15P55291 814 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 SLC35A2P78381 396 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 ZNF92Q03936 586 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 ZNF773Q6PK81 442 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 SLC16A9Q7RTY1 509 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 PRSS48Q7RTY5 328 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 SLC35F2Q8IXU6 374 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 OR13G1Q8NGZ3 307 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 SPRYD4Q8WW59 207 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-216ENST00000575599 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 MSI2Q96DH6 328 aaKnown RBP11.23□□□□□ -0.61
RPAIN-216ENST00000575599 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 MNTQ99583 582 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
RPAIN-216ENST00000575599 FGF20Q9NP95 211 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-216ENST00000575599 MRPS18AQ9NVS2 196 aaKnown RBP11.23□□□□□ -0.61
RPAIN-216ENST00000575599 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 EXOGQ9Y2C4 368 aaKnown RBP11.23□□□□□ -0.61
RPAIN-216ENST00000575599 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 EXOSC1Q9Y3B2 195 aaKnown RBP11.23□□□□□ -0.61
RPAIN-216ENST00000575599 TMEM14AQ9Y6G1 99 aa11.23□□□□□ -0.61
RPAIN-216ENST00000575599 TANC2Q9HCD6 1990 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 GGT3PA6NGU5 568 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 H0YL77 283 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 MYL12BO14950 172 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 HLA-DPB1P04440 258 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 OR2T7P0C7T2 308 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 TNFRSF1AP19438 455 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 RBMXP38159 391 aaKnown RBP11.22□□□□□ -0.61
RPAIN-216ENST00000575599 OPRL1P41146 370 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 HCCSP53701 268 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 GFOD2Q3B7J2 385 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 FAM166AQ6J272 317 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-216ENST00000575599 ACBD7Q8N6N7 88 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 OR2T27Q8NH04 317 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 HPS1Q92902 700 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 TIMD4Q96H15 378 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 TBX5Q99593 518 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 SLC30A2Q9BRI3 323 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 YIPF3Q9GZM5 350 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 ADGRL4Q9HBW9 690 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 BRD7Q9NPI1 651 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 INPP5EQ9NRR6 644 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 FKBP14Q9NWM8 211 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 DCAF16Q9NXF7 216 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 IL19Q9UHD0 177 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 LAMP5Q9UJQ1 280 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 DIMT1Q9UNQ2 313 aaKnown RBP11.22□□□□□ -0.61
RPAIN-216ENST00000575599 WIPI2Q9Y4P8 454 aa11.22□□□□□ -0.61
RPAIN-216ENST00000575599 ANK3Q12955 4377 aaKnown RBP11.22□□□□□ -0.61
RPAIN-216ENST00000575599 ISPDA4D126 451 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 F5H5P2 479 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 PHYHO14832 338 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 MLNRO43193 412 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 XRCC2O43543 280 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 TGFAP01135 160 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 MT-ND2P03891 347 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 C21orf33P30042 268 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-216ENST00000575599 ZNF121P58317 390 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-216ENST00000575599 SLC3A1Q07837 685 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 TIGD6Q17RP2 521 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 TMPRSS11AQ6ZMR5 421 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 FAM57BQ71RH2 274 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 RAB1CQ92928 201 aa11.21□□□□□ -0.61
RPAIN-216ENST00000575599 TTTY10Q9BZA0 68 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms