RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 ELL3Q9HB65 397 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 B3GNT2Q9NY97 397 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 ACOT9Q9Y305 439 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 RPL36Q9Y3U8 105 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 ZNFX1Q9P2E3 1918 aaKnown RBP4.03□□□□□ -1.76
TSR1-203ENST00000575049 SSC5DA1L4H1 1573 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 IGKV6D-21A0A0A0MT36 114 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 A0A0A6YYD5 115 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 IQCMA0A1B0GVH7 501 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 A0A1B0GW55 424 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 PSMB11A5LHX3 300 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 IGLON5A6NGN9 336 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 TVP23AA6NH52 213 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 hCG_2039718K7EN88 272 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 SULT2B1O00204 365 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 NME4O00746 187 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 MRPS14O60783 128 aaKnown RBP4.03□□□□□ -1.76
TSR1-203ENST00000575049 CEACAM4O75871 244 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 GJB5O95377 273 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 IGHV2-5P01817 119 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 HBE1P02100 147 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 FCGR3AP08637 254 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ACSM4P0C7M7 580 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4L2P0CJ85 424 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4L3P0CJ86 424 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4L4P0CJ87 422 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4L5P0CJ88 424 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4L6P0CJ89 424 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4L7P0CJ90 424 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 HLA-GP17693 338 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 BCL3P20749 454 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 HTR1EP28566 365 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 SERPINB1P30740 379 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 SHMT2P34897 504 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 SERPINB10P48595 397 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 RPL34P49207 117 aaKnown RBP4.03□□□□□ -1.76
TSR1-203ENST00000575049 TGM4P49221 684 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 SSR4P51571 173 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ACTBP60709 375 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ACTA2P62736 377 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ACTG1P63261 375 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ACTG2P63267 376 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ACTC1P68032 377 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ACTA1P68133 377 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 CRADDP78560 199 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 INCA1Q0VD86 236 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 IL18R1Q13478 541 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 KRR1Q13601 381 aaKnown RBP4.03□□□□□ -1.76
TSR1-203ENST00000575049 GGTLC2Q14390 218 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ZNF181Q2M3W8 571 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 SMUG1Q53HV7 270 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 FFAR4Q5NUL3 377 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 FAM219BQ5XKK7 198 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4L9Q6RFH8 374 aaPredicted RBP4.03□□□□□ -1.76
TSR1-203ENST00000575049 FRRS1Q6ZNA5 592 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 STRADAQ7RTN6 431 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 AKAP14Q86UN6 197 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 RIMKLAQ8IXN7 391 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ABHD12Q8N2K0 398 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 SVOPLQ8N434 492 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 BPIFB6Q8NFQ5 453 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 OR2L2Q8NH16 312 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 RHOXF1Q8NHV9 184 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 RFESDQ8TAC1 157 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ZNF502Q8TBZ5 544 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ZFP90Q8TF47 636 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 KCTD4Q8WVF5 259 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 FAM151AQ8WW52 585 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DNAJB3Q8WWF6 145 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 NEUROG1Q92886 237 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 YIPF6Q96EC8 236 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 CMTM7Q96FZ5 175 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 TMEM80Q96HE8 168 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 MICU1Q9BPX6 476 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 MRPL45Q9BRJ2 306 aaKnown RBP4.03□□□□□ -1.76
TSR1-203ENST00000575049 RSG1Q9BU20 258 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 ZNF426Q9BUY5 554 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 KIFC1Q9BW19 673 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 METTL8Q9H825 291 aaKnown RBP4.03□□□□□ -1.76
TSR1-203ENST00000575049 SIAEQ9HAT2 523 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 MCUBQ9NWR8 336 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 CLN6Q9NWW5 311 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 USE1Q9NZ43 259 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 DUX4Q9UBX2 424 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 CYB5R1Q9UHQ9 305 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 HES2Q9Y543 173 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 TIMM22Q9Y584 194 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 AUP1Q9Y679 476 aa4.03□□□□□ -1.76
TSR1-203ENST00000575049 AHDC1Q5TGY3 1603 aaPredicted RBP4.03□□□□□ -1.77
TSR1-203ENST00000575049 IGHV3-20A0A0C4DH32 117 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 EVPLLA8MZ36 301 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 FXYD1O00168 92 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 CDC7O00311 574 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 UPK1AO00322 258 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 IDH3BO43837 385 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 EEDO75530 441 aaKnown RBP4.02□□□□□ -1.77
TSR1-203ENST00000575049 UPK1BO75841 260 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 RPP14O95059 124 aaKnown RBP4.02□□□□□ -1.77
TSR1-203ENST00000575049 KRT75O95678 551 aa4.02□□□□□ -1.77
TSR1-203ENST00000575049 SNAP29O95721 258 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms