RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 NFASCO94856 1347 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ELP1O95163 1332 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 PCDH11XQ9BZA7 1347 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 ADCY9O60503 1353 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 KIAA0232Q92628 1395 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 NUP153P49790 1475 aaKnown RBP1.54□□□□□ -2.16
CHD3-217ENST00000574022 GON4LQ3T8J9 2241 aa1.54□□□□□ -2.16
CHD3-217ENST00000574022 IGHV3OR16-9A0A0B4J2B5 98 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 A0A0J9YXV3 536 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 GOLGA8KD6RF30 607 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 LINC01619G3V211 115 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 H0Y9J4 135 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 GOLGA8MH3BSY2 632 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 TNFRSF11BO00300 401 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 SHOX2O60902 331 aaPredicted RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 PSIP1O75475 530 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 MMP23AO75900 390 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RAB36O95755 333 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 KRT7P08729 469 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 CD3GP09693 182 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 P0C879 139 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 ZNF30P17039 623 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RCC1P18754 421 aaPredicted RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 FUT3P21217 361 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 HTR1DP28221 377 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RPA3P35244 121 aaPredicted RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 RBMXP38159 391 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 MAGEA2P43356 314 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RPS9P46781 194 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 TUFMP49411 452 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 CYB561P49447 251 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 NDUFA8P51970 172 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 ZNF138P52744 262 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 AQP5P55064 265 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RIPPLY3P57055 190 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 PRR3P79522 188 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 SLC7A9P82251 487 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 IL5RAQ01344 420 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 CD164Q04900 197 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 KDSRQ06136 332 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 BNIP2Q12982 314 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 MADCAM1Q13477 382 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 MED21Q13503 144 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 CAPRIN1Q14444 709 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 PSG5Q15238 335 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RGNQ15493 299 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 OR1Q1Q15612 314 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 TRIP13Q15645 432 aaPredicted RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 ZNF630Q2M218 657 aaPredicted RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 TMEM249Q2WGJ8 235 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 C15orf32Q32M92 178 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 C14orf177Q52M58 125 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 SYT6Q5T7P8 510 aaPredicted RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 LCE3BQ5TA77 95 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 METTL21CQ5VZV1 264 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RALGAPA1Q6GYQ0 2036 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 ARL9Q6T311 187 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 PLET1Q6UQ28 207 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 PAGE2Q7Z2X7 111 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 DCXRQ7Z4W1 244 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 ZNF329Q86UD4 541 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 C12orf56Q8IXR9 622 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 PRSS58Q8IYP2 241 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 CEND1Q8N111 149 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 COX18Q8N8Q8 333 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 C11orf72Q8NBR9 251 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 GPR26Q8NDV2 337 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 OR2L5Q8NG80 312 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 UBA3Q8TBC4 463 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 DYNC2LI1Q8TCX1 351 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RXFP2Q8WXD0 754 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 CDS1Q92903 461 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 NTAN1Q96AB6 310 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 PPWD1Q96BP3 646 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 FLYWCH2Q96CP2 140 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 LRRC58Q96CX6 371 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 C16orf74Q96GX8 76 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 TMEM101Q96IK0 257 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 Q96MT0 163 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 RDH12Q96NR8 316 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 ATOH8Q96SQ7 321 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 C20orf144Q9BQM9 153 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 POTEKPQ9BYX7 375 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 NXF2Q9GZY0 626 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 LINC00597Q9H2U6 94 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 PCNX3Q9H6A9 2034 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 METTL8Q9H825 291 aaKnown RBP1.53□□□□□ -2.16
CHD3-217ENST00000574022 ABCB9Q9NP78 766 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 ZDHHC4Q9NPG8 344 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 VNN3Q9NY84 501 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 ZNF226Q9NYT6 803 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 USE1Q9NZ43 259 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 DEC1Q9P2X7 70 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 VAX2Q9UIW0 290 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 FBXL3Q9UKT7 428 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 PLEKHG1Q9ULL1 1385 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 CLEC4EQ9ULY5 219 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 TFR2Q9UP52 801 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 TRAPPC4Q9Y296 219 aa1.53□□□□□ -2.16
CHD3-217ENST00000574022 SIGLEC9Q9Y336 463 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms