RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 LHFPL5Q8TAF8 219 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 FNDC8Q8TC99 324 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ZFAND1Q8TCF1 268 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 TNFAIP8L1Q8WVP5 186 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ARPC1AQ92747 370 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 PAGE5Q96GU1 130 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 TMEM80Q96HE8 168 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF285Q96NJ3 590 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 PFDN5Q99471 154 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SIGMAR1Q99720 223 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SLC25A33Q9BSK2 321 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 OR11A1Q9GZK7 315 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SCAND2PQ9GZW5 306 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 COA1Q9GZY4 146 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 SPNS1Q9H2V7 528 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 OR51J1Q9H342 316 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 NT5DC2Q9H857 520 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 FKRPQ9H9S5 495 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 UGT1A8Q9HAW9 530 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF224Q9NZL3 707 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 GSKIPQ9P0R6 139 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 MLXQ9UH92 298 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 MOKQ9UQ07 419 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 C14orf166Q9Y224 244 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 TRAPPC4Q9Y296 219 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 CEP152O94986 1710 aa4.17□□□□□ -1.74
TOPBP1-210ENST00000572787 PRDM2Q13029 1718 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 CCDC144AA2RUR9 1427 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 USP6P35125 1406 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 IGLV3-22A0A075B6J6 115 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 TGIF2-C20orf24A0A0A6YYL0 155 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 IGLV9-49A0A0B4J1Y8 123 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 IQCMA0A1B0GVH7 501 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM240AA0A1B0GVK7 77 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 LINC00587B1AMM8 73 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 GPD1P21695 349 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 USF1P22415 310 aaPredicted RBP4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 GALR1P47211 349 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 GCLMP48507 274 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 AMTP48728 403 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 UBE2E1P51965 193 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 CDKN2DP55273 166 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 FMODQ06828 376 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 EFEMP1Q12805 493 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 TEAD2Q15562 447 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 OR7A5Q15622 319 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 TECRLQ5HYJ1 363 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 OLFML2AQ68BL7 652 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF626Q68DY1 528 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 ELP2Q6IA86 826 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 BAIAP2L2Q6UXY1 529 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM231DQ6ZW35 169 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 ZNF676Q8N7Q3 588 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 OR4F15Q8NGB8 312 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 SKA2Q8WVK7 121 aaPredicted RBP4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 PCNPQ8WW12 178 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 IGFBPL1Q8WX77 278 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 ASB17Q8WXJ9 295 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 ASB13Q8WXK3 278 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 HAUS1Q96CS2 278 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 UBE2E2Q96LR5 201 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 C2orf48Q96LS8 159 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 KIFC1Q9BW19 673 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 ARV1Q9H2C2 271 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 KLK11Q9UBX7 282 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 UFC1Q9Y3C8 167 aa4.16□□□□□ -1.74
TOPBP1-210ENST00000572787 A0A1W2PP64 1363 aa4.15□□□□□ -1.74
TOPBP1-210ENST00000572787 CNTLNQ9NXG0 1405 aa4.15□□□□□ -1.74
TOPBP1-210ENST00000572787 GLTPD2A6NH11 291 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF814B7Z6K7 855 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 ATP6V1G2-DDX39BF2Z307 99 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 K7EMT4 169 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 GPR31O00270 319 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 TNFSF12O43508 249 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 KLF8O95600 359 aaPredicted RBP4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 TTC4O95801 387 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 CYB5R3P00387 301 aaPredicted RBP4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 OR10J4P0C629 311 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 LINC00271P0C7V0 271 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 HKR1P10072 659 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 GABRG2P18507 467 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 PI3P19957 117 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 SPINK2P20155 84 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 TAC1P20366 129 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 ANOS1P23352 680 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 S100PP25815 95 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 CCR7P32248 378 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 GPX4P36969 197 aaPredicted RBP4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 SOX3P41225 446 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 GDF5P43026 501 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 CRYBA2P53672 197 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 LIM2P55344 173 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 RPS27AP62979 156 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 GNG3P63215 75 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC7A9P82251 487 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 MRPS11P82912 194 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 PPP1R1AQ13522 171 aa4.15□□□□□ -1.75
TOPBP1-210ENST00000572787 IRF4Q15306 451 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms