RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CRTAPO75718 401 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CBR3O75828 277 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 GABARAPO95166 117 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TBX6O95947 436 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 HPRP00739 348 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 IFNA4P05014 189 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 S100A8P05109 93 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CRHP06850 196 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CT62P0C5K7 136 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 PSKH1P11801 424 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 RPS2P15880 293 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 NCF2P19878 526 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TPSB2P20231 275 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 BGNP21810 368 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 RPS3P23396 243 aaKnown RBP eCLIP4.46□□□□□ -1.72e-9■■■■□ 21.2
SF3B3-214ENST00000572365 EDNRAP25101 427 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 FRKP42685 505 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 HILS1P60008 231 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 UBA52P62987 128 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 GALK2Q01415 458 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 BST1Q10588 318 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 FADDQ13158 208 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 EBPQ15125 230 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TPSAB1Q15661 275 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CHI3L2Q15782 390 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TIMM50Q3ZCQ8 353 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TEX30Q5JUR7 227 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 VAX1Q5SQQ9 334 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 ATAD3CQ5T2N8 411 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 LRRC38Q5VT99 294 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 UBE2UQ5VVX9 321 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 RAET1LQ5VY80 246 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CASC4Q6P4E1 433 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 LEG1Q6P5S2 330 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 ZYG11AQ6WRX3 759 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 C18orf65Q6ZTR6 163 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 PGAP1Q75T13 922 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CDKL3Q8IVW4 592 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TUSC5Q8IXB3 177 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 KATNAL2Q8IYT4 538 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 C8orf59Q8N0T1 100 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF555Q8NEP9 628 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 SLC5A11Q8WWX8 675 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TMIGD2Q96BF3 282 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 ROPN1LQ96C74 230 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CCDC124Q96CT7 223 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 HBEGFQ99075 208 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 KCTD14Q9BQ13 255 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 C19orf43Q9BQ61 176 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF416Q9BWM5 594 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 SLC19A3Q9BZV2 496 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 NXF5Q9H1B4 397 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 DSN1Q9H410 356 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 RANBP3Q9H6Z4 567 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 COQ10BQ9H8M1 238 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 ACTR8Q9H981 624 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 IFT46Q9NQC8 304 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 INTS10Q9NVR2 710 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 SMPD3Q9NY59 655 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 MED11Q9P086 117 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 ACTR3BQ9P1U1 418 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 FBXO5Q9UKT4 447 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 IKZF3Q9UKT9 509 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 DIMT1Q9UNQ2 313 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 SLC22A14Q9Y267 594 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 MRPS33Q9Y291 106 aaKnown RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TRAPPC4Q9Y296 219 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 TPRKBQ9Y3C4 175 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 SOX21Q9Y651 276 aaPredicted RBP4.46□□□□□ -1.7
SF3B3-214ENST00000572365 AUP1Q9Y679 476 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 CACNG2Q9Y698 323 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 HSPE1-MOB4S4R3N1 261 aa4.46□□□□□ -1.7
SF3B3-214ENST00000572365 DOCK11Q5JSL3 2073 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 CCDC182A6NF36 153 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF98A6NK75 572 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 CLDN24A6NM45 220 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 BBIP1A8MTZ0 92 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF99A8MXY4 864 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 F8W036 122 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 APOC4-APOC2K7ER74 178 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 M0R1B8 84 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 PIN1P1O15428 100 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF780AO75290 641 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-214ENST00000572365 GCM2O75603 506 aaPredicted RBP4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SLC22A3O75751 556 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 IGLV2-11P01706 119 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 APOC2P02655 101 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 C1QBP02746 253 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 PRSS1P07477 247 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ZSCAN5DPP0CG00 497 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 MPC1LP0DKB6 136 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 CPN2P22792 545 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 GCAP28676 217 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ETV6P41212 452 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 ASMTP46597 345 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 GLIPR1P48060 266 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 SLC1A6P48664 564 aa4.45□□□□□ -1.7
SF3B3-214ENST00000572365 NUDT2P50583 147 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms