RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 FAM25EA8MYX2 175 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 SULT2B1O00204 365 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 RAD51DO75771 328 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 DLSTP36957 453 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 LUMP51884 338 aaPredicted RBP20.09■□□□□ 0.81
VPS53-211ENST00000571805 ATXN7L3Q14CW9 347 aaPredicted RBP20.09■□□□□ 0.81
VPS53-211ENST00000571805 BEX5Q5H9J7 111 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 PRAMEF20Q5VT98 475 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 MOB3CQ70IA8 216 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 ZNF283Q8N7M2 679 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 SAP25Q8TEE9 199 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 ZNF75AQ96N20 296 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 BARX1Q9HBU1 254 aaPredicted RBP20.09■□□□□ 0.81
VPS53-211ENST00000571805 OCIAD1Q9NX40 245 aa20.09■□□□□ 0.81
VPS53-211ENST00000571805 C5orf63A6NC05 138 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 FKBP2P26885 142 aaKnown RBP20.08■□□□□ 0.81
VPS53-211ENST00000571805 PI4KAP42356 2102 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 SLC35A1P78382 337 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 TMPPEQ6ZT21 453 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 KCTD9Q7L273 389 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 OR14K1Q8NGZ2 314 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 TERB2Q8NHR7 220 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 MRPS24Q96EL2 167 aaKnown RBP20.08■□□□□ 0.81
VPS53-211ENST00000571805 ZC3H10Q96K80 434 aaKnown RBP20.08■□□□□ 0.81
VPS53-211ENST00000571805 ZNF416Q9BWM5 594 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 TMEM59Q9BXS4 323 aa20.08■□□□□ 0.81
VPS53-211ENST00000571805 HCKP08631 526 aa20.08■□□□□ 0.8
VPS53-211ENST00000571805 CTSSP25774 331 aa20.08■□□□□ 0.8
VPS53-211ENST00000571805 CLDN17P56750 224 aa20.08■□□□□ 0.8
VPS53-211ENST00000571805 GRB2P62993 217 aaKnown RBP20.08■□□□□ 0.8
VPS53-211ENST00000571805 BTN1A1Q13410 526 aa20.08■□□□□ 0.8
VPS53-211ENST00000571805 OR10K1Q8NGX5 313 aa20.08■□□□□ 0.8
VPS53-211ENST00000571805 MS4A7Q9GZW8 240 aaPredicted RBP20.08■□□□□ 0.8
VPS53-211ENST00000571805 PCOLCEQ15113 449 aa20.07■□□□□ 0.8
VPS53-211ENST00000571805 GFOD2Q3B7J2 385 aa20.07■□□□□ 0.8
VPS53-211ENST00000571805 VAX1Q5SQQ9 334 aa20.07■□□□□ 0.8
VPS53-211ENST00000571805 CRIP3Q6Q6R5 217 aa20.07■□□□□ 0.8
VPS53-211ENST00000571805 H3F3AP84243 136 aa20.07■□□□□ 0.8
VPS53-211ENST00000571805 OCSTAMPQ9BR26 566 aa20.07■□□□□ 0.8
VPS53-211ENST00000571805 FSCN3Q9NQT6 498 aa20.07■□□□□ 0.8
VPS53-211ENST00000571805 CEACAM18A8MTB9 384 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 EEF1E1-BLOC1S5C9J1V9 151 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 MFNGO00587 321 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 TP53I11O14683 189 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 GDF9O60383 454 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 IGLV3-1P01715 115 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 CELA2AP08217 269 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 TAS2R31P59538 309 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 PNLIPRP3Q17RR3 467 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 TFAP2EQ6VUC0 442 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 THAP6Q8TBB0 222 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 ARHGAP5-AS1Q96IT6 56 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 LYZL4Q96KX0 146 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 DNTTIP1Q9H147 329 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 GPR132Q9UNW8 380 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 TLX3O43711 291 aaPredicted RBP20.06■□□□□ 0.8
VPS53-211ENST00000571805 LSM6P62312 80 aaKnown RBP20.06■□□□□ 0.8
VPS53-211ENST00000571805 SGCAQ16586 387 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 GTPBP8Q8N3Z3 284 aaPredicted RBP20.06■□□□□ 0.8
VPS53-211ENST00000571805 ZBTB44Q8NCP5 570 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 OR56B1Q8NGI3 324 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 PHYHIPLQ96FC7 376 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 ZNF471Q9BX82 626 aaPredicted RBP20.06■□□□□ 0.8
VPS53-211ENST00000571805 MBD2Q9UBB5 411 aa20.06■□□□□ 0.8
VPS53-211ENST00000571805 CRTAPO75718 401 aaPredicted RBP20.05■□□□□ 0.8
VPS53-211ENST00000571805 CYC1P08574 325 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 PHYHD1Q5SRE7 291 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 FAM89BQ8N5H3 189 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 ARRDC1Q8N5I2 433 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 GPER1Q99527 375 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 C5orf66Q9H5L9 145 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 LOC102723996A0A087X1L8 192 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 CRHP06850 196 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 PRKACBP22694 351 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 DHPSP49366 369 aaPredicted RBP20.05■□□□□ 0.8
VPS53-211ENST00000571805 STARP49675 285 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 ACTBL2Q562R1 376 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 TMEM128Q5BJH2 165 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 DMRTC1Q5HYR2 192 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 LYSMD4Q5XG99 296 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 TMEM230Q96A57 120 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 GAREM1Q9H706 876 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 GLS2Q9UI32 602 aa20.05■□□□□ 0.8
VPS53-211ENST00000571805 WDFY3Q8IZQ1 3526 aa20.04■□□□□ 0.8
VPS53-211ENST00000571805 PRF1P14222 555 aa20.04■□□□□ 0.8
VPS53-211ENST00000571805 SERPINF1P36955 418 aa20.04■□□□□ 0.8
VPS53-211ENST00000571805 C1QL2Q7Z5L3 287 aa20.04■□□□□ 0.8
VPS53-211ENST00000571805 DTX1Q86Y01 620 aa20.04■□□□□ 0.8
VPS53-211ENST00000571805 TMEM185AQ8NFB2 350 aa20.04■□□□□ 0.8
VPS53-211ENST00000571805 LHFPL5Q8TAF8 219 aa20.04■□□□□ 0.8
VPS53-211ENST00000571805 LIN37Q96GY3 246 aaPredicted RBP20.04■□□□□ 0.8
VPS53-211ENST00000571805 A0A1B0GW55 424 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 DUX4L2P0CJ85 424 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 DUX4L3P0CJ86 424 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 DUX4L4P0CJ87 422 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 DUX4L5P0CJ88 424 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 DUX4L6P0CJ89 424 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 DUX4L7P0CJ90 424 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 PSMB6P28072 239 aa20.03■□□□□ 0.8
VPS53-211ENST00000571805 ECH1Q13011 328 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms