RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ANKRD30BLA7E2S9 258 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 A8MXK9 166 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 PPIAL4DF5H284 164 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 PSMD9O00233 223 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 PHF1O43189 567 aaPredicted RBP10.92□□□□□ -0.66
CNOT1-220ENST00000569916 FOXH1O75593 365 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 PPIAL4FP0DN26 164 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 GSK3AP49840 483 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 HOXA4Q00056 320 aaPredicted RBP10.92□□□□□ -0.66
CNOT1-220ENST00000569916 ROM1Q03395 351 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 OR8B8Q15620 311 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 ZNF404Q494X3 552 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 DCAF12L2Q5VW00 463 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 ZFP1Q6P2D0 407 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 KCTD18Q6PI47 426 aaPredicted RBP10.92□□□□□ -0.66
CNOT1-220ENST00000569916 DEGS2Q6QHC5 323 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 WDR86Q86TI4 376 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 GID4Q8IVV7 300 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 SPERTQ8NA61 448 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 PLPP7Q8NBV4 271 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 OR11L1Q8NGX0 322 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 LYZL4Q96KX0 146 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 OR8B4Q96RC9 309 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 RBM4BQ9BQ04 359 aaKnown RBP10.92□□□□□ -0.66
CNOT1-220ENST00000569916 TMEM246Q9BRR3 403 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 TTTY10Q9BZA0 68 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 RIBC2Q9H4K1 309 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 PPP1R3EQ9H7J1 279 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 FN3KRPQ9HA64 309 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 ADGRL4Q9HBW9 690 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 FAM206AQ9NX38 181 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 POLR3KQ9Y2Y1 108 aaPredicted RBP10.92□□□□□ -0.66
CNOT1-220ENST00000569916 PPIAL4AQ9Y536 164 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 ATRQ13535 2644 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 LOC105371242A0A075B767 164 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.91□□□□□ -0.66
CNOT1-220ENST00000569916 J3QLI3 93 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 EI24O14681 340 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 ALPLP05186 524 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 WNT2P09544 360 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 IRF2P14316 349 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 RPS2P15880 293 aaKnown RBP10.91□□□□□ -0.66
CNOT1-220ENST00000569916 GATA3P23771 443 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 ACKR3P25106 362 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 CSNK2A3Q8NEV1 391 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 ASB17Q8WXJ9 295 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 MROQ9BYG7 248 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 METTL17Q9H7H0 456 aaPredicted RBP10.91□□□□□ -0.66
CNOT1-220ENST00000569916 MMP26Q9NRE1 261 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 HAO2Q9NYQ3 351 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 USE1Q9NZ43 259 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 H2AFY2Q9P0M6 372 aaPredicted RBP10.91□□□□□ -0.66
CNOT1-220ENST00000569916 LRCH1Q9Y2L9 728 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 TMEM14AQ9Y6G1 99 aa10.91□□□□□ -0.66
CNOT1-220ENST00000569916 TRAPPC2LH3BP13 241 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 ZNF254O75437 659 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 GRPP07492 148 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 CPT2P23786 658 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 DCTDP32321 178 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 CXCR4P61073 352 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 MFGE8Q08431 387 aaPredicted RBP10.9□□□□□ -0.66
CNOT1-220ENST00000569916 MZT1Q08AG7 82 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 ESCO2Q56NI9 601 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 ZNF826PQ6ZT77 177 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 SLC35F2Q8IXU6 374 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 ZNF679Q8IYX0 411 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 GCSAMQ8N6F7 178 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 C19orf18Q8NEA5 215 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 OR8S1Q8NH09 359 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 MNTQ99583 582 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 PAPOLGQ9BWT3 736 aaKnown RBP10.9□□□□□ -0.66
CNOT1-220ENST00000569916 C14orf119Q9NWQ9 140 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 C1orf123Q9NWV4 160 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 CLN6Q9NWW5 311 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 RNF7Q9UBF6 113 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 MIOXQ9UGB7 285 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 WARS2Q9UGM6 360 aaKnown RBP10.9□□□□□ -0.66
CNOT1-220ENST00000569916 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 ZNF391Q9UJN7 358 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 RHBDD3Q9Y3P4 386 aa10.9□□□□□ -0.66
CNOT1-220ENST00000569916 WNK2Q9Y3S1 2297 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 DOCK11Q5JSL3 2073 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 A0A0U1RQV5 110 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 TMEM269A0A1B0GVZ9 245 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 ACOD1A6NK06 481 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 A6NLC8 198 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 RNF212BA8MTL3 300 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 PHYHO14832 338 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 SRSF10O75494 262 aaKnown RBP10.89□□□□□ -0.67
CNOT1-220ENST00000569916 IGLV3-1P01715 115 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF12P17014 697 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 HTR1FP30939 366 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 CD80P33681 288 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 GNALP38405 381 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 RIDAP52758 137 aaKnown RBP10.89□□□□□ -0.67
CNOT1-220ENST00000569916 SRSF2Q01130 221 aaKnown RBP10.89□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF154Q13106 437 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 SNCBQ16143 134 aa10.89□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF829Q3KNS6 432 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms