RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SMIM11AP58511 58 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 SORDQ00796 357 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 SOWAHCQ53LP3 525 aaPredicted RBP5.9□□□□□ -1.46
SMG1-217ENST00000569764 PAGE3Q5JUK9 113 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 FRG2Q64ET8 278 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 ZNF550Q7Z398 422 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 ANGPTL5Q86XS5 388 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 SPPL2CQ8IUH8 684 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 MUC15Q8N387 334 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 OR6M1Q8NGM8 313 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 FRG2BQ96QU4 278 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 OR2A14Q96R47 310 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 ZNF426Q9BUY5 554 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 CYSLTR2Q9NS75 346 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 C2orf42Q9NWW7 574 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 VPS29Q9UBQ0 182 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 NCOR2Q9Y618 2525 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 MEIOCA2RUB1 952 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 F5H768 121 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 RAB29O14966 203 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 PPP1R2P9O14990 202 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 GNG7O60262 68 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 GNLYP22749 145 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 ERP29P30040 261 aaKnown RBP5.9□□□□□ -1.46
SMG1-217ENST00000569764 DAP3P51398 398 aaKnown RBP5.9□□□□□ -1.46
SMG1-217ENST00000569764 RELBQ01201 579 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 CXorf66Q5JRM2 361 aaPredicted RBP5.9□□□□□ -1.46
SMG1-217ENST00000569764 NSUN5P2Q63ZY6 315 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 FIGNL1Q6PIW4 674 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 C12orf54Q6X4T0 127 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 PTOV1Q86YD1 416 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 WFDC3Q8IUB2 231 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 ZDHHC23Q8IYP9 409 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 SLC22A18ASQ8N1D0 253 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 OR4F6Q8NGB9 312 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 OR10G3Q8NGC4 313 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 OR52I1Q8NGK6 324 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 SFXN5Q8TD22 340 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 CYGBQ8WWM9 190 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 PTH2Q96A98 100 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 SLCO4A1Q96BD0 722 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 ZNF501Q96CX3 271 aaPredicted RBP5.9□□□□□ -1.46
SMG1-217ENST00000569764 SPRTNQ9H040 489 aaPredicted RBP5.9□□□□□ -1.46
SMG1-217ENST00000569764 STOX2Q9P2F5 926 aaPredicted RBP5.9□□□□□ -1.46
SMG1-217ENST00000569764 CACNA1AO00555 2505 aa5.9□□□□□ -1.46
SMG1-217ENST00000569764 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 IGHV5-51A0A0C4DH38 117 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 A0A0G2JN53 185 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 FFAR3O14843 346 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 GPR42O15529 346 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 TPST2O60704 377 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 FKBP6O75344 327 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 SLC22A5O76082 557 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 OR10J4P0C629 311 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 PVALBP20472 110 aaPredicted RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 NPBWR2P48146 333 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 RAB7AP51149 207 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 ZNF84P51523 738 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 PTTG1IPP53801 180 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 CKS1BP61024 79 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 ZNF658BQ4V348 819 aaPredicted RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 SLC35D3Q5M8T2 416 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 FAM198BQ6UWH4 519 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 Q6ZPB1 254 aaPredicted RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 NOXA1Q86UR1 476 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 C10orf111Q8N326 155 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 PHOSPHO1Q8TCT1 267 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 WIPF2Q8TF74 440 aaPredicted RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 ASB17Q8WXJ9 295 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 PIGCQ92535 297 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 AURKBQ96GD4 344 aaPredicted RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 GGACTQ9BVM4 153 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 CHST5Q9GZS9 411 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 SPAG4Q9NPE6 437 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 MCUBQ9NWR8 336 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 FOXJ2Q9P0K8 574 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 NDRG4Q9ULP0 352 aaKnown RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 GPR132Q9UNW8 380 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 RNF11Q9Y3C5 154 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 MRPS18CQ9Y3D5 142 aaKnown RBP5.9□□□□□ -1.47
SMG1-217ENST00000569764 CKAP5Q14008 2032 aa5.9□□□□□ -1.47
SMG1-217ENST00000569764 SAC3D1A6NKF1 404 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 OR12D1P0DN82 309 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 SNRPD2P62316 118 aaKnown RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 LSM11P83369 360 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMG1-217ENST00000569764 GTF2H2Q13888 395 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 FASTKQ14296 549 aaKnown RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 CPTPQ5TA50 214 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 OR4C11Q6IEV9 310 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 ZNF770Q6IQ21 691 aaPredicted RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 GTF2H2CQ6P1K8 395 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 DNM1P34Q6PK57 102 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 C20orf204Q6ZNR8 217 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 GLB1L2Q8IW92 636 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 INO80EQ8NBZ0 244 aaPredicted RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 EMG1Q92979 244 aaKnown RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 MED11Q9P086 117 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 SLC45A2Q9UMX9 530 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 SERPINE2P07093 398 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 SLC35E2P0CK97 266 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms