RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 NAGKQ9UJ70 344 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 INSL6Q9Y581 213 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 MED19A0JLT2 244 aaPredicted RBP9.7□□□□□ -0.86
CLK3-226ENST00000569406 ZNF354AO60765 605 aaPredicted RBP9.7□□□□□ -0.86
CLK3-226ENST00000569406 PMS2P2O95744 297 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 PPIBP23284 216 aaKnown RBP9.7□□□□□ -0.86
CLK3-226ENST00000569406 ARR3P36575 388 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 RAB28P51157 221 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 PDE7AQ13946 482 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 TAF9Q16594 264 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 TOMM20LQ6UXN7 152 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 OVCH1Q7RTY7 1134 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 ERGIC1Q969X5 290 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 ZBTB8AQ96BR9 441 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 OR6C1Q96RD1 312 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 SLC35B3Q9H1N7 401 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 KIR3DX1Q9H7L2 352 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 LRFN1Q9P244 771 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 CORO2BQ9UQ03 480 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 POMT1Q9Y6A1 747 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 C5orf67F2Z3F1 127 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 KLF8O95600 359 aaPredicted RBP9.7□□□□□ -0.86
CLK3-226ENST00000569406 GABRA4P48169 554 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 TBPL1P62380 186 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 HBA1P69905 142 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 NAAAQ02083 359 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 ZNF770Q6IQ21 691 aaPredicted RBP9.7□□□□□ -0.86
CLK3-226ENST00000569406 SYNPRQ8TBG9 265 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 FAM71F1Q96KD3 344 aaPredicted RBP9.7□□□□□ -0.86
CLK3-226ENST00000569406 CNTNAP3Q9BZ76 1288 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 CNTD2Q9H8S5 307 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 CYTL1Q9NRR1 136 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 CYP8B1Q9UNU6 501 aa9.7□□□□□ -0.86
CLK3-226ENST00000569406 A0A1W2PR48 441 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 LINC01553A4QN01 128 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 GLOD5A6NK44 160 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 CSN2P05814 226 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 PIN1Q13526 163 aaPredicted RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 SAMD13Q5VXD3 122 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 LINC01551Q86U37 167 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 PAQR4Q8N4S7 273 aaPredicted RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 OR6N1Q8NGY5 312 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 EGLN3Q9H6Z9 239 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 TRIM36Q9NQ86 728 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 SERGEFQ9UGK8 458 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 YLPM1P49750 1951 aaKnown RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 A0A1B0GV72 72 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 CPSF4LA6NMK7 179 aaKnown RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 OR10J1P30954 320 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 RAC3P60763 192 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 H3F3AP84243 136 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 TDRG1Q3Y452 100 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 C2orf27AQ580R0 203 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 RPL7L1Q6DKI1 246 aaKnown RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 LINC00615Q96LM1 132 aaPredicted RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 OR11A1Q9GZK7 315 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 PLAGL1Q9UM63 463 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 C14orf166Q9Y224 244 aaKnown RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.69□□□□□ -0.86
CLK3-226ENST00000569406 PRAMEF26H0Y7S4 382 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 FCARP24071 287 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 HMGA2P52926 109 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 PDX1P52945 283 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 TAS2R41P59536 307 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 OR2V1Q8NHB1 315 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 OR1E3Q8WZA6 343 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 LOXL4Q96JB6 756 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 KLHL28Q9NXS3 571 aa9.69□□□□□ -0.86
CLK3-226ENST00000569406 CACNA1IQ9P0X4 2223 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 B4GALT2O60909 372 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 KAT7O95251 611 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 ASGR2P07307 311 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 OR5H8P0DN80 308 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 ERGP11308 486 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 MMP11P24347 488 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 CDK2P24941 298 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 EPHA8P29322 1005 aaPredicted RBP9.68□□□□□ -0.86
CLK3-226ENST00000569406 OPRD1P41143 372 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 DHRS2Q13268 280 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 FDX2Q6P4F2 183 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 OR10W1Q8NGF6 305 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 APOBEC4Q8WW27 367 aaKnown RBP9.68□□□□□ -0.86
CLK3-226ENST00000569406 BADQ92934 168 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 TMEM19Q96HH6 336 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 COX14Q96I36 57 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 HIST1H2AAQ96QV6 131 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 PCGF1Q9BSM1 259 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 DMDP11532 3685 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 MSGN1A6NI15 193 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 H3BQ15 152 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 FFAR1O14842 300 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 GPRIN2O60269 458 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 CTSVO60911 334 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 ADH5P11766 374 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 DUSP3P51452 185 aaPredicted RBP9.68□□□□□ -0.86
CLK3-226ENST00000569406 LIM2P55344 173 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 DPTQ07507 201 aa9.68□□□□□ -0.86
CLK3-226ENST00000569406 COMMD6Q7Z4G1 85 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms