RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 SCRN3Q0VDG4 424 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 MAB21L1Q13394 359 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 ENDOGQ14249 297 aaKnown RBP4.74□□□□□ -1.65
CDH13-212ENST00000569144 HABP2Q14520 560 aaPredicted RBP4.74□□□□□ -1.65
CDH13-212ENST00000569144 OR8B8Q15620 311 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 ARMC4Q5T2S8 1044 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 NCR3LG1Q68D85 454 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 ZNF613Q6PF04 617 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 EPGNQ6UW88 154 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 HIST3H2AQ7L7L0 130 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 RANBP3LQ86VV4 465 aaPredicted RBP4.74□□□□□ -1.65
CDH13-212ENST00000569144 SLC30A8Q8IWU4 369 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 PNKDQ8N490 385 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 Q8N7P7 452 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 PCYOX1LQ8NBM8 494 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 OR51G2Q8NGK0 314 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 OR5L1Q8NGL2 311 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 LRRC8CQ8TDW0 803 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 ST8SIA4Q92187 359 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 RORBQ92753 470 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 HDAC2Q92769 488 aaKnown RBP4.74□□□□□ -1.65
CDH13-212ENST00000569144 TNFRSF14Q92956 283 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 HIST1H2ACQ93077 130 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 RASD2Q96D21 266 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 NKX3-1Q99801 234 aaPredicted RBP4.74□□□□□ -1.65
CDH13-212ENST00000569144 ECSITQ9BQ95 431 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 SPATA5L1Q9BVQ7 753 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 CHID1Q9BWS9 393 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 EVA1AQ9H8M9 152 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 SDR39U1Q9NRG7 319 aaPredicted RBP4.74□□□□□ -1.65
CDH13-212ENST00000569144 TMEM100Q9NV29 134 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 ZNF446Q9NWS9 450 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 PTTG3PQ9NZH4 202 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 KAAG1Q9UBP8 84 aa4.74□□□□□ -1.65
CDH13-212ENST00000569144 LSM4Q9Y4Z0 139 aaKnown RBP4.74□□□□□ -1.65
CDH13-212ENST00000569144 GAGE12BA1L429 117 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 GAGE12HA6NDE8 117 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 NPIPB13A6NJU9 1138 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 NPIPB4C9JG80 1138 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 UBDO15205 165 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 SGCEO43556 437 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 TPST1O60507 370 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 ANP32DO95626 131 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 LHBP01229 141 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 GYPAP02724 150 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 HLA-DPB1P04440 258 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 CHRM2P08172 466 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 MRPL19P49406 292 aaKnown RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 BMXP51813 675 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 DLX1P56177 255 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 RPL18Q07020 188 aaKnown RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 FHL2Q14192 279 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 MPPED2Q15777 294 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 GTDC1Q4AE62 458 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 PRAMEF6Q5VXH4 476 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 C1orf94Q6P1W5 598 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 TTC33Q6PID6 262 aaPredicted RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 KRT73Q86Y46 540 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 FAM90A1Q86YD7 464 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 C10orf111Q8N326 155 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 BOLLQ8N9W6 283 aaKnown RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 BHLHE23Q8NDY6 225 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 OR9I1Q8NGQ6 314 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 FNDC8Q8TC99 324 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 C17orf50Q8WW18 174 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 MAL2Q969L2 176 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 VPS33AQ96AX1 596 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 RBP7Q96R05 134 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 ASCL2Q99929 193 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 WFDC6Q9BQY6 131 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 MCRIP2Q9BUT9 160 aaKnown RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 ALG12Q9BV10 488 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 RAD21L1Q9H4I0 556 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 POLE4Q9NR33 117 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 INIPQ9NRY2 104 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 UFSP2Q9NUQ7 469 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 INTS9Q9NV88 658 aaKnown RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 ZIM2Q9NZV7 527 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 FAM30AQ9NZY2 134 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 DNAJB11Q9UBS4 358 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 SLC13A4Q9UKG4 626 aa4.73□□□□□ -1.65
CDH13-212ENST00000569144 TSSC4Q9Y5U2 329 aaPredicted RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 HUWE1Q7Z6Z7 4374 aaKnown RBP4.73□□□□□ -1.65
CDH13-212ENST00000569144 CSMD3Q7Z407 3707 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 A0A1W2PPL8 197 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 PRORSD1PA6NEY8 169 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 OR6C6A6NF89 314 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 H0YHG0 523 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 KPNA4O00629 521 aaPredicted RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 POLR3GO15318 223 aaPredicted RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 RAMP3O60896 148 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 SLC22A3O75751 556 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 LYPD3O95274 346 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 PTBP3O95758 552 aaKnown RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 THY1P04216 161 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 ALDOBP05062 364 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 IL6P05231 212 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 HOXB9P17482 250 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms