RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 HSD11B1P28845 292 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 EPHA2P29317 976 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 DDOSTP39656 456 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 NAA10P41227 235 aaPredicted RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 SLC15A1P46059 708 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 PITPNBP48739 271 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 COMPP49747 757 aaPredicted RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 DAPP51397 102 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 GNB2P62879 340 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 TAF13Q15543 124 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 ARMCX4Q5H9R4 360 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 SLC35D3Q5M8T2 416 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 WDR25Q64LD2 544 aaPredicted RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 LRRN1Q6UXK5 716 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 ZNF826PQ6ZT77 177 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 FAM57BQ71RH2 274 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 DOK3Q7L591 496 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 SHFQ7M4L6 423 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 FAM90A1Q86YD7 464 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 BCL6BQ8N143 479 aaPredicted RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 ZNF454Q8N9F8 522 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 OR8B3Q8NGG8 313 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 OR52H1Q8NGJ2 320 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 OR11L1Q8NGX0 322 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 FAM216AQ8WUB2 273 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 HPSE2Q8WWQ2 592 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 DNAJC9Q8WXX5 260 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 OTULINQ96BN8 352 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 UPRTQ96BW1 309 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 ITPKCQ96DU7 683 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 NRBF2Q96F24 287 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 REEP6Q96HR9 211 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 LYZL4Q96KX0 146 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 OR8B2Q96RD0 313 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 SUCNR1Q9BXA5 334 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 GABARAPL1Q9H0R8 117 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 TLNRD1Q9H1K6 362 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 YY1AP1Q9H869 796 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 FN3KRPQ9HA64 309 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 PAPOLBQ9NRJ5 636 aaKnown RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 DNAJC27Q9NZQ0 273 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 ZNF69Q9UC07 566 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 MIOXQ9UGB7 285 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 NUP50Q9UKX7 468 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 AUP1Q9Y679 476 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 TRAV40A0A0B4J280 105 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 KIR2DS1A0A191URI9 304 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 OOEPA6NGQ2 149 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 LGALS8O00214 317 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 PRKYO43930 277 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 MITFO75030 526 aaPredicted RBP6.5□□□□□ -1.37
CDH3-209ENST00000569080 IGLV3-1P01715 115 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 APOC1P02654 83 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 H2BFMP0C1H6 154 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 IRF2P14316 349 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 MMP9P14780 707 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 GSK3AP49840 483 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 CRISP1P54107 249 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 UBA52P62987 128 aaKnown RBP6.5□□□□□ -1.37
CDH3-209ENST00000569080 CSNK2BP67870 215 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 ELF3P78545 371 aaPredicted RBP6.5□□□□□ -1.37
CDH3-209ENST00000569080 EFNB1P98172 346 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 APOFQ13790 326 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 ATP6AP1Q15904 470 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 TIGD6Q17RP2 521 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 AADACL4Q5VUY2 407 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 TEX36Q5VZQ5 186 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 WDR82Q6UXN9 313 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 NLRC3Q7RTR2 1065 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 KRT74Q7RTS7 529 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 BPIFB2Q8N4F0 458 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 SIGLECL1Q8N7X8 197 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 SPERTQ8NA61 448 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 OR1M1Q8NGA1 313 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 OR8B12Q8NGG6 310 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 RAB40AQ8WXH6 277 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 DUS3LQ96G46 650 aaKnown RBP6.5□□□□□ -1.37
CDH3-209ENST00000569080 PLEKHA8Q96JA3 519 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 MRI1Q9BV20 369 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 OR10A2Q9H208 303 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 RGCCQ9H4X1 137 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 ZNF556Q9HAH1 456 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 C1orf123Q9NWV4 160 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 FAM206AQ9NX38 181 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 RNF7Q9UBF6 113 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 CLN8Q9UBY8 286 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 COPS3Q9UNS2 423 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 RHBDD3Q9Y3P4 386 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 LRP12Q9Y561 859 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 N6AMT1Q9Y5N5 214 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 SOX21Q9Y651 276 aaPredicted RBP6.5□□□□□ -1.37
CDH3-209ENST00000569080 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
CDH3-209ENST00000569080 CMYA5Q8N3K9 4069 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 A0A1B0GW55 424 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 TMEM89A2RUT3 159 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 A6NLC8 198 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 ZAR1LA6NP61 321 aa6.49□□□□□ -1.37
CDH3-209ENST00000569080 ANKRD30BLA7E2S9 258 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms