RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 VSTM2BA6NLU5 285 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 A8MUA0 341 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SERPINE3A8MV23 424 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 G3V3Y1 287 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 PPP1R2P9O14990 202 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SIVA1O15304 175 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 PSTPIP1O43586 416 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SRP72O76094 671 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SCELO95171 688 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 APOA1P02647 267 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SERPINA7P05543 415 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 HOXD4P09016 255 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 UBCP0CG48 685 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF43P17038 809 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 CXCR2P25025 360 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 DCKP27707 260 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 CD80P33681 288 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 HTR2BP41595 481 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 GPR4P46093 362 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 EMDP50402 254 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 RPL26P61254 145 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 TPM4P67936 248 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 PAX5Q02548 391 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SLC25A11Q02978 314 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 RIPPLY1Q0D2K3 151 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ST3GAL3Q11203 375 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 PAFAH1B3Q15102 231 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 KLHL38Q2WGJ6 581 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 TRIM16LQ309B1 348 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 DEFB113Q30KQ7 82 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 MS4A18Q3C1V0 323 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 VPS26BQ4G0F5 336 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 CCSMST1Q4G0I0 132 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ACER2Q5QJU3 275 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 LY6G6FQ5SQ64 297 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 LGSNQ5TDP6 509 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR8G2PQ6IF36 304 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 FAHD2BQ6P2I3 314 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 APOOLQ6UXV4 268 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 C16orf47Q6ZP98 133 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF571Q7Z3V5 609 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 GLT6D1Q7Z4J2 308 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 BPIFB2Q8N4F0 458 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 KIF2BQ8N4N8 673 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 LINC00612Q8N6U2 182 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 C15orf54Q8N8G6 183 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF491Q8N8L2 437 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 LINC01555Q8NAE3 123 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ACBD4Q8NC06 268 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 MDS2Q8NDY4 140 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 PROKR2Q8NFJ6 384 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR4F6Q8NGB9 312 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR52I1Q8NGK6 324 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR10G7Q8NGN6 311 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR13C4Q8NGS5 318 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 LINC01560Q8TB33 94 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 NDNFQ8TB73 568 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 FNDC8Q8TC99 324 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 HAUS1Q96CS2 278 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ASB9Q96DX5 294 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 IMP4Q96G21 291 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 DCUN1D1Q96GG9 259 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 FAHD2AQ96GK7 314 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 PLEKHA8Q96JA3 519 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 KCNA7Q96RP8 456 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 KCNS3Q9BQ31 491 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 FAM173AQ9BQD7 235 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SELENOSQ9BQE4 189 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 UTP23Q9BRU9 249 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 HINT2Q9BX68 163 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 IL22Q9GZX6 179 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 SLITRK2Q9H156 845 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 GAL3ST2Q9H3Q3 398 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 WDR54Q9H977 334 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 WDR41Q9HAD4 459 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 BEX1Q9HBH7 125 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 CHMP5Q9NZZ3 219 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 IL17CQ9P0M4 197 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF282Q9UDV7 671 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 RPL26L1Q9UNX3 145 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 ASF1AQ9Y294 204 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 KPTNQ9Y664 436 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 POLEQ07864 2286 aa2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 FLNAP21333 2647 aaKnown RBP2.59□□□□□ -1.99
HMGB1P6-201ENST00000569046 MPDZO75970 2070 aa2.59□□□□□ -2
HMGB1P6-201ENST00000569046 SEC16AO15027 2179 aa2.59□□□□□ -2
HMGB1P6-201ENST00000569046 IGHV3-38A0A0C4DH36 116 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 TRBV7-9A0A0J9YWB2 115 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 LOC285095A0A1B0GVY8 99 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 PINLYPA6NC86 204 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 USP27XA6NNY8 438 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 FAM166BA8MTA8 275 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 IQCF5A8MTL0 148 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 SHISA9B4DS77 424 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 C11orf98E9PRG8 122 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 SCAMP2O15127 329 aaKnown RBP2.58□□□□□ -2
HMGB1P6-201ENST00000569046 AIREO43918 545 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 RAMP1O60894 148 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 ZNF254O75437 659 aa2.58□□□□□ -2
HMGB1P6-201ENST00000569046 AP2A1O95782 977 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms